A comprehensive account of SARS-CoV-2 genome structure, incurred mutations, lineages and COVID-19 vaccination program

Shailendra Sharma deepmala sehgal Apekshita Singh Shailendra Goel SoomNath Raina (2022, [Artículo])

Corona Viruses Genome Structure Novel Mutations Resistance to Vaccines SARS-CoV-2 CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA COVID-19 ANTIBODY FORMATION LIFE CYCLE VACCINATION VACCINES LINEAGE

Do provisioning ecosystem services change along gradients of increasing agricultural production?

Ronju Ahammad Stephanie Tomscha Sarah Gergel Frédéric Baudron Jean-Yves Duriaux Chavarría Samson Foli Dominic Rowland Josh Van Vianen Terence Sunderland (2024, [Artículo])

Context: Increasing agricultural production shapes the flow of ecosystem services (ES), including provisioning services that support the livelihoods and nutrition of people in tropical developing countries. Although our broad understanding of the social-ecological consequences of agricultural intensification is growing, how it impacts provisioning ES is still unknown. Objectives: We examined the household use of provisioning ES across a gradient of increasing agricultural production in seven tropical countries (Bangladesh, Burkina Faso, Cameroon, Ethiopia, Indonesia, Nicaragua and Zambia). We answered two overarching questions: (1) does the use of provisioning ES differ along gradients of agriculture production ranging from zones of subsistence to moderate and to high agriculture production? and (2) are there synergies and/or trade-offs within and among groups of ES within these zones? Methods: Using structured surveys, we asked 1900 households about their assets, livestock, crops, and collection of forest products. These questions allowed us to assess the number of provisioning ES households used, and whether the ES used are functionally substitutable (i.e., used similarly for nutrition, material, and energy). Finally, we explored synergies and trade-offs among household use of provisioning ES. Results: As agricultural production increased, provisioning ES declined both in total number and in different functional groups used. We found more severe decreases in ES for relatively poorer households. Within the functional groups of ES, synergistic relationships were more often found than trade-offs in all zones, including significant synergies among livestock products (dairy, eggs, meat) and fruits. Conclusions: Considering landscape context provides opportunities to enhance synergies among provisioning services for households, supporting resilient food systems and human well-being.

Agricultural Production Zones Agricultural Intensifcation Synergies and Trade-Offs Landscape Multifunctionality Social-Ecological Systems CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA AGRICULTURE INTENSIFICATION ECOSYSTEM SERVICES LANDSCAPE SOCIAL-ECOLOGICAL RESILIENCE ECOSYSTEM SERVICES

LGBT+ media on the Internet: experiences of communication and information in Mexico

RAUL ANTHONY OLMEDO NERI (2023, [Artículo, Artículo])

Two digital LGBT+ media in Mexico are analyzed to understand the implications of their operation and their articulation with the informational and social needs of sex-gender populations. It starts from the communicational perspective to conceptualize these projects as exercises in technological appropriation but highlighting their empirical intersections with other analytical frameworks. Through the method of systematizing the experience, the trajectories of ANODIS and Seis Franjas Mx have been recovered; through semi-structured interviews conducted with their co-founders in February 2022, the reasons, horizons and challenges that these projects have faced are analyzed. The results show that the lack of LGBT+ content and representations in the media motivate the creation of these projects, which articulate a sense of collaboration and sociality with other users belonging to sex-gender communities. In addition, the people participating in these projects are part of the LGBT+ populations, becoming them producers and consumers of information that claim the gender-identity dimension in the content. Likewise, these initiatives are specified in the youth stage of their co-founders, which refers to rethinking the role of LGBT+ youth in the new forms of activism and socialization mediated by Internet. Finally, given the progressive formation of this area of ​​knowledge and the lack of consensus on its definition, it is proposed to name this interdisciplinary field of study as LGBT+ Communicational Studies, to show an epistemological perspective from communication and a Latin American ontological position.

Medios de comunicación Internet LGBT Jóvenes redes sociales de apoyo CIENCIAS SOCIALES CIENCIAS SOCIALES Media LGBT youth

Integrative transcriptome and metabolome analysis reveals the mechanisms of light-induced pigmentation in purple waxy maize

XUECAI ZHANG Yunbi Xu Prasanna Boddupalli (2023, [Artículo])

Pigment Accumulation Light Response CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA ANTHOCYANINS LIGHT METABOLOMICS TRANSCRIPTOMICS WAXY MAIZE

Addressing agricultural labour issues is key to biodiversity-smart farming

Thomas Daum Frédéric Baudron Matin Qaim Ingo Grass (2023, [Artículo])

There is an urgent need for agricultural development strategies that reconcile agricultural production and biodiversity conservation. This is especially true in the Global South where population growth is rapid and much of the world's remaining biodiversity is located. Combining conceptual thoughts with empirical insights from case studies in Indonesia and Ethiopia, we argue that such strategies will have to pay more attention to agricultural labour dynamics. Farmers have a strong motivation to reduce the heavy toil associated with farming by adopting technologies that save labour but can negatively affect biodiversity. Labour constraints can also prevent farmers from adopting technologies that improve biodiversity but increase labour intensity. Without explicitly accounting for labour issues, conservation efforts can hardly be successful. We hence highlight the need for biodiversity-smart agriculture, that is farming practices or systems that reconcile biodiversity with land and labour productivity. Our empirical insights suggest that technological and institutional options to reconcile farmers' socio-economic goals and biodiversity conservation exist but that more needs to be done to implement such options at scale.

Land Sharing Trade-Offs CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA AGRICULTURAL DEVELOPMENT BIODIVERSITY CONSERVATION LABOUR SUSTAINABILITY

Agricultural value chains in Sudan: an annotated bibliography

Hugo De Groote Paswel Marenya (2023, [Libro])

CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA AGRICULTURAL VALUE CHAINS CASH CROPS FOOD CROPS LIVESTOCK SOCIOECONOMIC ASPECTS GENDER SOCIAL INCLUSION POSTHARVEST LOSSES BIBLIOGRAPHIES

Transcriptome mining provides insights into cell wall metabolism and fiber lignification in Agave tequilana Weber

Luis Fernando Maceda Lopez ELSA BEATRIZ GONGORA CASTILLO Enrique Ibarra-Laclette DALIA C. MORAN VELAZQUEZ AMARANTA GIRON RAMIREZ Matthieu Bourdon José Luis Villalpando Aguilar Gabriela Chavez-Calvillo Toomer John Tang Parastoo Azadi Jorge Manuel Santamaría Fernández Itzel López-Rosas Mercedes G Lopez June Simpson FULGENCIO ALATORRE COBOS (2022, [Artículo])

Resilience of growing in arid and semiarid regions and a high capacity of accumulating sugar-rich biomass with low lignin percentages have placed Agave species as an emerging bioen-ergy crop. Although transcriptome sequencing of fiber-producing agave species has been explored, molecular bases that control wall cell biogenesis and metabolism in agave species are still poorly understood. Here, through RNAseq data mining, we reconstructed the cellulose biosynthesis pathway and the phenylpropanoid route producing lignin monomers in A. tequilana, and evaluated their expression patterns in silico and experimentally. Most of the orthologs retrieved showed differential expression levels when they were analyzed in different tissues with contrasting cellulose and lignin accumulation. Phylogenetic and structural motif analyses of putative CESA and CAD proteins allowed to identify those potentially involved with secondary cell wall formation. RT-qPCR assays revealed enhanced expression levels of AtqCAD5 and AtqCESA7 in parenchyma cells associated with extraxylary fibers, suggesting a mechanism of formation of sclerenchyma fibers in Agave similar to that reported for xylem cells in model eudicots. Overall, our results provide a framework for un-derstanding molecular bases underlying cell wall biogenesis in Agave species studying mechanisms involving in leaf fiber development in monocots. © 2022 by the authors. Licensee MDPI, Basel, Switzerland.

AGAVE CELL WALLS LIGNOCELLULOSE CAD PROTEIN CESA PROTEIN SCLERENCHYMA BIOLOGÍA Y QUÍMICA CIENCIAS DE LA VIDA GENÉTICA GENÉTICA MOLECULAR DE PLANTAS GENÉTICA MOLECULAR DE PLANTAS

Restauración ecológica de la laguna de Bojórquez, Benito Juárez, Quintana Roo: 5.2 Supervisión de acciones y desarrollo de herramienta de soporte para generación de escenarios de restauración ecológica

Ariosto Aguilar PEDRO MISAEL ALBORNOZ GONGORA Jorge Laurel Castillo Ruben Morales Jorge Laurel Castillo VICTOR HUGO ALCOCER YAMANAKA (2012, [Documento de trabajo])

Para mejorar las condiciones ambientales de la laguna de Bojórquez, el Gobierno del estado de Quintana Roo gestionó recursos federales para llevar a cabo el proyecto denominado “Restauración ecológica de la laguna de Bojórquez”. En éste se contempla la construcción de una herramienta de soporte para la generación de escenarios de restauración ecológica. Dicha herramienta consiste en la implementación de un modelo hidrodinámico para la caracterización del sistema lagunar en condiciones actuales y de proyecto, con las últimas se pretende dar solución a los problemas que actualmente enfrenta la laguna. De igual manera, se muestran las bases de datos utilizadas, datos adquiridos mediante mediciones sistemáticas, y las simulaciones numéricas del sistema lagunar en condiciones actuales y de proyecto.

Lagunas Restauración ecológica Hidrodinámica Modelos matemáticos Informes de proyectos Laguna de Bojórquez INGENIERÍA Y TECNOLOGÍA

Corrigendum: The sole DNA ligase in Entamoeba histolytica is a high-fidelity DNA ligase involved in DNA damage repair

ELISA IRENE AZUARA LICEAGA Abigail Betanzos CESAR SALVADOR CARDONA FELIX ELIZABETH JACQUELINE CASTAÑEDA ORTIZ HELIOS CARDENAS HERNANDEZ ROSA ELENA CARDENAS GUERRA GUILLERMO PASTOR PALACIOS GUILLERMINA GARCIA RIVERA DAVID HERNANDEZ ALVAREZ CARLOS HUMBERTO TRASVIÑA ARENAS Corina Diaz Quezada Esther Orozco Luis Gabriel Brieba de Castro (2022, [Artículo])

"A Corrigendum on

The soleDNA ligase in Entamoeba histolytica is a high-fidelity DNA ligase involved in DNA damage repair

By Azuara-Liceaga E, Betanzos A, Cardona-Felix CS, Castañeda-Ortiz EJ, Cárdenas H, Cárdenas-Guerra RE, Pastor-Palacios G, García-Rivera G, Hernández-Álvarez D, Trasviña-Arenas CH, Diaz-Quezada C, Orozco E and Brieba LG (2018) Front. Cell. Infect. Microbiol. 8:214. doi: 10.3389/fcimb.2018.00214"

EhDNAlig Protozoan DNA insults Ligation Repairing 8-oxoG adduct NER and BER pathways BIOLOGÍA Y QUÍMICA CIENCIAS DE LA VIDA MICROBIOLOGÍA MICROBIOLOGÍA

Agroecology can promote climate change adaptation outcomes without compromising yield in smallholder systems

Sieglinde Snapp Yodit Kebede Eva Wollenberg (2023, [Artículo])

A critical question is whether agroecology can promote climate change mitigation and adaptation outcomes without compromising food security. We assessed the outcomes of smallholder agricultural systems and practices in low- and middle-income countries (LMICs) against 35 mitigation, adaptation, and yield indicators by reviewing 50 articles with 77 cases of agroecological treatments relative to a baseline of conventional practices. Crop yields were higher for 63% of cases reporting yields. Crop diversity, income diversity, net income, reduced income variability, nutrient regulation, and reduced pest infestation, indicators of adaptative capacity, were associated with 70% or more of cases. Limited information on climate change mitigation, such as greenhouse gas emissions and carbon sequestration impacts, was available. Overall, the evidence indicates that use of organic nutrient sources, diversifying systems with legumes and integrated pest management lead to climate change adaptation in multiple contexts. Landscape mosaics, biological control (e.g., enhancement of beneficial organisms) and field sanitation measures do not yet have sufficient evidence based on this review. Widespread adoption of agroecological practices and system transformations shows promise to contribute to climate change services and food security in LMICs. Gaps in adaptation and mitigation strategies and areas for policy and research interventions are finally discussed.

CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA CLIMATE CHANGE CROPS FOOD SUPPLY GAS EMISSIONS GREENHOUSE GASES FARMING SYSTEMS AGROECOLOGY FOOD SECURITY LESS FAVOURED AREAS SMALLHOLDERS YIELDS NUTRIENTS BIOLOGICAL PEST CONTROL CARBON SEQUESTRATION LEGUMES