Multi-trait, multi-environment deep learning modeling for genomic-enabled prediction of plant traits

Osval Antonio Montesinos-Lopez Jose Crossa Francisco Javier Martin Vallejo (2018, [Artículo])

Deep Learning Genomic Prediction Bayesian Modeling Shared Data Resources CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA BAYESIAN THEORY RESOURCES DATA BREEDING PROGRAMMES

Monitoring the threat of unintentional transgene flow into maize gene banks and breeding materials

Monica Mezzalama Rodomiro Ortiz (2010, [Artículo])

Genetic Integrity Germplasm Enhancement Genetically Modified Maize CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA BREEDING GERMPLASM MAIZE RECOMBINANT DNA TRANSGENES GENETIC ENGINEERING PLANTS BIOSAFETY

Shopping for Ecological Indices? On the Use of Incidence-Based Species Compositional Similarity Measures

IAN MACGREGOR FORS FEDERICO ESCOBAR SARRIA JUAN FERNANDO ESCOBAR IBAÑEZ NATALIA MESA SIERRA FREDY ALEXANDER ALVARADO ROBERTO Rafael Rueda Hernández CLAUDIA ELIZABETH MORENO ORTEGA Ina Falfán ERICK JOAQUIN CORRO MENDEZ Eduardo Octavio Pineda Arredondo Amandine Bourg JOSE LUIS AGUILAR LOPEZ (2022, [Artículo])

"β-diversity has been under continuous debate, with a current need to better understand the way in which a new wave of measures work. We assessed the results of 12 incidence-based β-diversity indices. Our results of gradual species composition overlap between paired assemblages considering progressive differences in species richness show the following: (i) four indices (β-2, β-3, β-3.s, and βr) should be used cautiously given that results with no shared species retrieve results that could be misinterpreted; (ii) all measures conceived specifically as partitioned components of species compositional dissimilarities ought to be used as such and not as independent measures per se; (iii) the non-linear response of some indices to gradual species composition overlap should be interpreted carefully, and further analysis using their results as dependent variables should be performed cautiously; and (iv) two metrics (βsim and βsor) behave predictably and linearly to gradual species composition overlap. We encourage ecologists using measures of β-diversity to fully understand their mathematical nature and type of results under the scenario to be used in order to avoid inappropriate and misleading inferences."

Beta diversity Nestedness Replacement Richness difference Species turnover BIOLOGÍA Y QUÍMICA CIENCIAS DE LA VIDA BIOLOGÍA VEGETAL (BOTÁNICA) ECOLOGÍA VEGETAL ECOLOGÍA VEGETAL

Indian wheat genomics initiative for harnessing the potential of wheat germplasm resources for breeding disease-resistant, nutrient-dense, and climate-resilient cultivars

Sundeep Kumar Reyaz Mir Pawan Kulwal UTTAM KUMAR suneel kumar Shailendra Sharma Ravinder Singh Amit Singh Dr. Subhash Bhardwaj Manoj Prasad Kuldeep Singh (2022, [Artículo])

Indian Wheat Genomics Initiative Genomic Selection CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA WHEAT GENETIC RESOURCES MARKER-ASSISTED SELECTION GENE BANKS STRESS ABIOTIC STRESS BIOTIC STRESS

Editorial: Sorghum and pearl millet as climate resilient crops for food and nutrition security

Palak Chaturvedi Mahalingam Govindaraj Govindan Velu Wolfram Weckwerth (2022, [Artículo])

Climate Smart Crops Foxtail Millet CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA BREEDING FINGER MILLET FOOD SECURITY SETARIA ITALICA GENETIC RESOURCES PEARL MILLET SORGHUM

Seed integrity, effect of temperature and storage time on germination of Populus luziarum and P. primaveralepensis, endangered subtropical species from Mexico

César Jacobo Pereira MIGUEL ANGEL MUÑIZ CASTRO JOSE ANTONIO VAZQUEZ GARCIA Joel David Flores Rivas ALEJANDRO MUÑOZ URIAS FRANCISCO MARTIN HUERTA MARTINEZ (2022, [Artículo])

"Background: Populus luziarum and P. primaveralepensis are endemic species of western Mexico; growing in riparian forests they are critically endangered. The best way to conserve their seeds is unknown, which could be limiting for their conservation.

Hypothesis: The germinability of both subtropical species is like that of boreal and template Salicaceae species that disperse seeds in spring and early summer, as they germinate quickly with high percentages, and rapidly lose their viability when stored at ambient temperature.

Studied species: Populus luziarum and P. primaveralepensis. Study site and dates: Western Trans-Mexican Volcanic Belt. Jalisco, Mexico. October 2019.

Methods: The physical integrity of the seeds was assessed by X-ray imaging and compared with germinability. In addition, the effect of storage time (nine weeks) under two temperatures (4 and 21 °C) on the percentage and mean germination rate was evaluated.

Results: No significant differences were found between physical integrity and germination in freshly collected seeds for both species. Germination in the first 24 hrs was 91 and 95 % for Populus luziarum and P. primaveralepensis, respectively (week 0). Germination percentages were lower when stored at 21 °C, but P. primaveralepensis was decreased more slowly.

Conclusions: Seeds of subtropical Populus respond similarly to those of species from temperate and boreal climates with early seed dispersal, a crucial condition for establishing ex situ reforestation and conservation programs."

Salicaceae Seed physical integrity Seed storage conditions Subtropical endemic species White poplars BIOLOGÍA Y QUÍMICA CIENCIAS DE LA VIDA BIOLOGÍA VEGETAL (BOTÁNICA) BIOLOGÍA VEGETAL (BOTÁNICA)

Development of a next generation SNP genotyping array for wheat

Simon Griffiths Susanne Dreisigacker Alison Bentley Gina Brown-Guedira (2023, [Artículo])

Axiom Array High Throughput Genotyping Hexaploid Wheat Copy Number Variation Analysis CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA SINGLE NUCLEOTIDE POLYMORPHISMS WHEAT GENOTYPING GENETIC DIVERSITY (AS RESOURCE)

The generation challenge programme platform: Semantic standards and workbench for crop science

Richard Bruskiewich Guy Davenport Mathieu Rouard Reinhard Simon Samart Wanchana Trushar Shah Victor Jun Ulat Andrew Farmer Pankaj Jaiswal Mark Wilkinson David Marshall Alyssa Collins (2008, [Artículo])

CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA CROP IMPROVEMENT GENETIC RESOURCES PLANT BREEDING BIODIVERSITY COMPUTER APPLICATIONS DIGITAL TECHNOLOGY DATA PROCESSING

Molecular characterization of doubled haploid lines derived from different cycles of the Iowa Stiff Stalk Synthetic (BSSS) maize population

Jode Edwards Sarah Hearne (2023, [Artículo])

Homozygous Lines CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA GENETIC DIVERSITY (AS RESOURCE) GENETIC RESOURCES ZEA MAYS GENOTYPING DOUBLED HAPLOIDS SINGLE NUCLEOTIDE POLYMORPHISMS

Genetic diversity and genome-wide association study for the phenology response of winter wheats of North America, Western Asia, and Europe

Susanne Dreisigacker Marta Lopes Miguel Sanchez-Garcia (2023, [Artículo])

Winter Wheat Panel Precision Phenology Effective Markers CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA GENETIC DIVERSITY (AS RESOURCE) GENOME-WIDE ASSOCIATION STUDIES PHENOLOGY PHOTOPERIODICITY POPULATION STRUCTURE VERNALIZATION WINTER WHEAT