Odonata (Insecta) de tres cuencas en la costa de Chiapas: lista de especies y registro nuevo

Perla Alonso_EguíaLis (2015, [Artículo])

Se recolectaron 512 adultos del orden Odonata, que corresponden a 41 especies. Estas se agrupan en 24 géneros que pertenecen a las familias Calopterygidae, Coenagrionidae y Libellulidae. El porcentaje de individuos recolectados fue del 58.54% para el suborden Zygoptera y 41.46% para el suborden Anisoptera. La representatividad del muestreo de las especies esperadas a lo largo de todo el estudio varió de 75.6% para septiembre hasta 95.2% para enero. Se registra por primera vez a la especie Brachymesia herbida para Chiapas. La especie dominante fue Argia pulla, la cual se recolectó en todos los sitios. Mediante el índice de similitud de Morisita-Horn, se agruparon las especies y se relacionaron con las características del ambiente en las subregiones: alta, media y baja.

Libélulas Chiapas BIOLOGÍA Y QUÍMICA

Relación de adenovirus 36 con la obesidad, expresión de genes (c/ebpB y hif-1A) y la morfologia del tejido adiposo.

JORGE BARRERA ALCOCER (2021, [Tesis de doctorado])

Introducción: Al origen infeccioso de la obesidad se le conoce como ¿infectobesidad¿. Los primeros estudios realizados en modelos animales, como pollos, ratones y primates no humanos, asociaron la presencia de anticuerpos contra HAd36 con el desarrollo de la obesidad y la ganancia de peso, de igual manera los ensayos realizados en preadipocitos (3T3-L1) y células madre adiposas humanas (hASCc) han demostrado que HAd36 se asocia con la expresión de genes implicados en la diferenciación celular y el metabolismo de lípidos. Los estudios realizados para identificar el DNA viral en tejido adiposo son pocos y los resultados inconsistentes. Objetivo: Analizar la presencia del DNA de HAd36 en biopsias de tejido adiposo subcutáneo y su relación con la obesidad, cambios morfológicos de los adipocitos y la expresión de genes adipogénicos y de metabolismo celular. Materiales y Métodos: Se recolectaron un total de 52 biopsias de tejido adiposo subcutáneo de mujeres sometidas a liposucción y/o lipectomia. Se realizó una evaluación antropométrica y clínico-bioquímica. La identificación del DNA de HAd36 se realizó por PCR convencional, la expresión de los genes C/EBPB, HIF-1A y ¿-actina se determinó utilizando sondas TaqMan. La morfología celular se analizó en secciones de tejido adiposo teñidas con H&E, la estimación del número y tamaño de las células se realizó con el software Image J Fiji. Resultados: Se identificó el DNA de HAd36 en 16 muestras de tejido adiposo subcutáneo (31%). La presencia del DNA viral no se asoció con los parámetros antropométricos o metabólicos, tampoco con cambios en la morfología del tejido adiposo. Los niveles de expresión de mRNA para C/EBPB y HIF-1A no mostraron diferencias significativas entre las muestras positivas y negativas al DNA viral (p>0.05). Conclusión: El DNA de HAd36 puede estar presente en el tejido adiposo subcutáneo, pero la presencia del DNA viral no se encontró relacionado con los cambios morfológicos en este tejido, ni con la expresión de genes como C/EBPB y HIF-1A.

BIOLOGÍA Y QUÍMICA CIENCIAS DE LA VIDA GENÉTICA GENÉTICA CLÍNICA

Comparative live-cell imaging analyses of SPA-2, BUD-6 and BNI-1 in Neurospora crassa reveal novel features of the filamentous fungal polarisome

Alexander Lichius (2012, [Artículo])

A key multiprotein complex involved in regulating the actin cytoskeleton and secretory machinery required for polarized growth in fungi, is the polarisome. Recognized core constituents in budding yeast are the proteins Spa2, Pea2, Aip3/Bud6, and the key effector Bni1. Multicellular fungi display a more complex polarized morphogenesis than yeasts, suggesting that the filamentous fungal polarisome might fulfill additional functions. In this study, we compared the subcellular organization and dynamics of the putative polarisome components BUD-6 and BNI-1 with those of the bona fide polarisome marker SPA-2 at various developmental stages of Neurospora crassa. All three proteins exhibited a yeast-like polarisome configuration during polarized germ tube growth, cell fusion, septal pore plugging and tip repolarization. However, the localization patterns of all three proteins showed spatiotemporally distinct characteristics during the establishment of new polar axes, septum formation and cytokinesis, and maintained hyphal tip growth. Most notably, in vegetative hyphal tips BUD-6 accumulated as a subapical cloud excluded from the Spitzenkörper (Spk), whereas BNI-1 and SPA-2 partially colocalized with the Spk and the tip apex. Novel roles during septal plugging and cytokinesis, connected to the reinitiation of tip growth upon physical injury and conidial maturation, were identified for BUD-6 and BNI-1, respectively. Phenotypic analyses of gene deletion mutants revealed additional functions for BUD-6 and BNI-1 in cell fusion regulation, and the maintenance of Spk integrity. Considered together, our findings reveal novel polarisome-independent functions of BUD-6 and BNI-1 in Neurospora, but also suggest that all three proteins cooperate at plugged septal pores, and their complex arrangement within the apical dome of mature hypha might represent a novel aspect of filamentous fungal polarisome architecture. © 2012 Lichius et al.

fungal protein, protein BNI 1, protein BUD 6, protein SPA 2, protein Spk, unclassified drug, actin binding protein, cytoskeleton protein, fungal protein, article, cell fusion, cellular distribution, comparative study, conidium, controlled study, cyto BIOLOGÍA Y QUÍMICA CIENCIAS DE LA VIDA MICROBIOLOGÍA MICROBIOLOGÍA

Synthetic libraries of shark vNAR domains with different cysteine numbers within the CDR3

OLIVIA CABANILLAS BERNAL (2019, [Artículo])

The variable domain of New Antigen Receptors (vNAR) from sharks, present special characteristics in comparison to the conventional antibody molecules such as: small size (12–15 kDa), thermal and chemical stability and great tissue penetration, that makes them a good alternative source as therapeutic or diagnostic agents. Therefore, it is essential to improve techniques used for the development and selection of vNAR antibodies that recognize distinct antigens. The development of synthetic antibody libraries offers a fast option for the generation of antibodies with the desired characteristics. In this work three synthetic antibody libraries were constructed; without cysteines (Cys), with one Cys and with two Cys residues within its CDR3, with the objective of determining whether the presence or absence of Cys in the CDR3 favors the isolation of vNAR clones from a synthetic library. The libraries were validated selecting against six mammalian proteins. At least one vNAR was found for each of the antigens, and a clone coming from the library without Cys in the CDR3 was selected with all the antigens. In vitro angiogenesis assay with the isolated anti-VEGF antibodies, suggest that these vNARs are capable of inhibiting in vitro angiogenesis. In silico analysis of anti-VEGF antibodies showed that vNARs from synthetic libraries could rival antibodies with affinity maturation by in silico modeling. © 2019 Cabanillas-Bernal et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

aquaporin 1, carcinoembryonic antigen, cysteine, fibroblast growth factor 2, glycophorin A, leukemia inhibitory factor, vasculotropin, vasculotropin antibody, angiogenesis inhibitor, antibody, cysteine, lymphocyte antigen receptor, vasculotropin A, a BIOLOGÍA Y QUÍMICA CIENCIAS DE LA VIDA BIOFÍSICA BIOFÍSICA

Community ecology across bacteria, archaea and microbial eukaryotes in the sediment and seawater of coastal Puerto Nuevo, Baja California

Sabah Ul-Hasan (2019, [Artículo])

Microbial communities control numerous biogeochemical processes critical for ecosystem function and health. Most analyses of coastal microbial communities focus on the characterization of bacteria present in either sediment or seawater, with fewer studies characterizing both sediment and seawater together at a given site, and even fewer studies including information about non-bacterial microbial communities. As a result, knowledge about the ecological patterns of microbial biodiversity across domains and habitats in coastal communities is limited–despite the fact that archaea, bacteria, and microbial eukaryotes are present and known to interact in coastal habitats. To better understand microbial biodiversity patterns in coastal ecosystems, we characterized sediment and seawater microbial communities for three sites along the coastline of Puerto Nuevo, Baja California, Mexico using both 16S and 18S rRNA gene amplicon sequencing. We found that sediment hosted approximately 500-fold more operational taxonomic units (OTUs) for bacteria, archaea, and microbial eukaryotes than seawater (p < 0.001). Distinct phyla were found in sediment versus seawater samples. Of the top ten most abundant classes, Cytophagia (bacterial) and Chromadorea (eukaryal) were specific to the sediment environment, whereas Cyanobacteria and Bacteroidia (bacterial) and Chlorophyceae (eukaryal) were specific to the seawater environment. A total of 47 unique genera were observed to comprise the core taxa community across environment types and sites. No archaeal taxa were observed as part of either the abundant or core taxa. No significant differences were observed for sediment community composition across domains or between sites. For seawater, the bacterial and archaeal community composition was statistically different for the Major Outlet site (p < 0.05), the site closest to a residential area, and the eukaryal community composition was statistically different between all sites (p < 0.05). Our findings highlight the distinct patterns and spatial heterogeneity in microbial communities of a coastal region in Baja California, Mexico. This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication.

BIOLOGÍA Y QUÍMICA CIENCIAS DE LA VIDA BIOFÍSICA BIOFÍSICA

Genetic analysis of Vibrio parahaemolyticus O3:K6 strains that have been isolated in Mexico since 1998

CARLOS ABRAHAM GUERRERO RUIZ (2017, [Artículo])

Vibrio parahaemolyticus is an important human pathogen that has been isolated worldwide from clinical cases, most of which have been associated with seafood consumption. Environmental and clinical toxigenic strains of V. parahaemolyticus that were isolated in Mexico from 1998 to 2012, including those from the only outbreak that has been reported in this country, were characterized genetically to assess the presence of the O3:K6 pandemic clone, and their genetic relationship to strains that are related to the pandemic clonal complex (CC3). Pathogenic tdh+ and tdh+/trh+ strains were analyzed by pulsed-field gel electrophoresis (PFGE) and multilocus sequence typing (MLST). Also, the entire genome of a Mexican O3:K6 strain was sequenced. Most of the strains were tdh/ORF8-positive and corresponded to the O3:K6 serotype. By PFGE and MLST, there was very close genetic relationship between ORF8/O3:K6 strains, and very high genetic diversities from non-pandemic strains. The genetic relationship is very close among O3:K6 strains that were isolated in Mexico and sequences that were available for strains in the CC3, based on the PubMLST database. The whole-genome sequence of CICESE-170 strain had high similarity with that of the reference RIMD 2210633 strain, and harbored 7 pathogenicity islands, including the 4 that denote O3:K6 pandemic strains. These results indicate that pandemic strains that have been isolated in Mexico show very close genetic relationship among them and with those isolated worldwide. © 2017 Guerrero et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

Article, bacterial strain, biofouling, controlled study, Crassostrea, food intake, gene sequence, genetic analysis, genetic variability, Japan, Mexican, Mexico, molecular phylogeny, nonhuman, pandemic, pathogenicity island, sea food, serotyping, toxi BIOLOGÍA Y QUÍMICA CIENCIAS DE LA VIDA GENÉTICA GENÉTICA

Uso potencial de pellets para el tratamiento de aguas contaminadas con arsénico en comunidades de Xichú, Gto., México

Pellets potential use for the treatment of contaminated water with arsenic in communities Xichú, Gto. Mexico

ALMA HORTENSIA SERAFIN MUÑOZ MELINA GUADALUPE MEDINA GARCIA FRANCISCO AGUSTIN VIDO GARCIA BERENICE NORIEGA LUNA ADRIAN ZAMORATEGUI MOLINA (2017, [Artículo])

En el presente trabajo se llevó a cabo el desarrollo del uso de pellets, provenientes de resi-duos lignocelulósicos, para el tratamiento de aguas contaminadas con arsénico de las comu-nidades del municipio de Xichú, Gto., México. Las muestras de agua, n = 72, se evaluaron con base en la NOM-127-SSA1-1994. La concentración más alta de arsénico fue arriba de los límites permisibles, 0.2 mg.L–1 ± 0.04 mg.L–1. Los pellets utilizados fueron a partir de aserrín, paja de trigo, agave y sorgo. Se optimizó la rampa de temperatura para la mejor consistencia de los pellets. Se realizaron varios diseños experimentales con los pellets, n = 162, a diferentes condiciones, para desarrollar el proceso de activación y tratamiento con Fe (III). Los pellets obtenidos fueron colocados en muestras de agua contaminadas con ar-sénico por 24 h. Se logró una remoción de arsénico a pH entre 6.5 a 7, del 98.50% ± 1.2%.

Present work was carried out development of use of pellets from lignocellulosic waste for arsenic-contaminated waters treatment in communities of the municipality of Xichu, Guanajuato, Mexico. Water samples, n = 72, were evaluated based on NOM-127-SSA1-1994.

The highest concentration of arsenic was above permissible limits, 0.2 mg.L–1 ± 0.04 mg.L–1. Pellets used were from sawdust, wheat straw, agave and sorghum. Temperature ramp to the best consistency of pellets is optimized. Several experimental designs with pellets were

performed,n = 162, in different conditions to develop activation process and treatment with Fe (III). Pellets obtained were placed in water samples contaminated with arsenic 24 h. Arsenic removal at pH between 6.5 to 7, of 98.50% ± 1.2% was achieved.

BIOLOGÍA Y QUÍMICA Arsénico Pellets Lignocelulósica Tecnologías sustentables Xichú, Gto. México Arsenic Lignocellulosic wastes Sustainable technologies

The Banana MaWRKY18, MaWRKY45, MaWRKY60 and MaWRKY70 Genes Encode Functional Transcription Factors and Display Differential Expression in Response to Defense Phytohormones

SERGIO GARCIA LAYNES VIRGINIA AURORA HERRERA VALENCIA Lilia Guadalupe Tamayo Torres VERONICA LIMONES BRIONES FELIPE ALONSO BARREDO POOL FRAY MARTIN BAAS ESPINOLA Ángel Gabriel Alpuche Solís CARLOS ALBERTO PUCH HAU SANTY PERAZA ECHEVERRIA (2022, [Artículo])

"WRKY transcription factors (TFs) play key roles in plant defense responses through phytohormone signaling pathways. However, their functions in tropical fruit crops, especially in banana, remain largely unknown. Several WRKY genes from the model plants rice (OsWRKY45) and Arabidopsis (AtWRKY18, AtWRKY60, AtWRKY70) have shown to be attractive TFs for engineering disease resistance. In this study, we isolated four banana cDNAs (MaWRKY18, MaWRKY45, MaWRKY60, and MaWRKY70) with homology to these rice and Arabidopsis WRKY genes. The MaWRKY cDNAs were isolated from the wild banana Musa acuminata ssp. malaccensis, which is resistant to several diseases of this crop and is a progenitor of most banana cultivars. The deduced amino acid sequences of the four MaWRKY cDNAs revealed the presence of the conserved WRKY domain of ~60 amino acids and a zinc-finger motif at the N-terminus. Based on the number of WRKY repeats and the structure of the zinc-finger motif, MaWRKY18 and MaWRKY60 belong to group II of WRKY TFs, while MaWRKY45 and MaWRKY70 are members of group III. Their corresponding proteins were located in the nuclei of onion epidermal cells and were shown to be functional TFs in yeast cells. Moreover, expression analyses revealed that the majority of these MaWRKY genes were upregulated by salicylic acid (SA) or methyl jasmonate (MeJA) phytohormones, although the expression levels were relatively higher with MeJA treatment. The fact that most of these banana WRKY genes were upregulated by SA or MeJA, which are involved in systemic acquired resistance (SAR) or induced systemic resistance (ISR), respectively, make them interesting candidates for bioengineering broad-spectrum resistance in this crop."

Banana Transcription factor WRKY Defense phytohormones Salicylic acid Methyl jasmonate SAR ISR Broad-spectrum resistance BIOLOGÍA Y QUÍMICA CIENCIAS DE LA VIDA GENÉTICA GENÉTICA

Avifauna en fragmentos de Bosque Mesófilo de Montaña y vegetación secundaria en el municipio de Huatusco, Veracruz

Ricardo Serna-Lagunes GERARDO BENJAMÍN TORRES CANTÚ Miguel A. García_Martínez (2023, [Artículo])

El Bosque Mesófilo de Montaña (BMM) del centro de Veracruz, México, representa un paisaje alterado por actividades antrópicas, por lo que es necesario evaluar el potencial evolutivo y adaptativo de las aves refugiadas en el sitio, las cuales se enfrentan a un paisaje con un gradiente heterogéneo. El objetivo de este estudio fue determinar la diversidad de aves en fragmentos de BMM y vegetación secundaria (VS), en el predio Finca La Pastoría, Huatusco, Veracruz, así como, asociar su presencia y/o alimentación a cada hábitat evaluado. Se identificaron las especies y número de individuos en 14 sitios de observación de aves, con el método de muestreo basado en conteo por puntos con radio fijo de 30 m. Se registraron 100 especies pertenecientes a 33 familias y 15 órdenes. En el BMM se identificaron 916 individuos, correspondientes a 89 especies, y en VS 331 individuos de 54 especies, encontrando diferencias significativas de diversidad de aves entre coberturas de muestreo. Destacan los registros de Dendrortyx barbatus, Leptotila verreauxi y Vireo griseus, por ser endémicas. La primera está clasificada en peligro de extinción, mientras que la segunda se encuentra sujeta a protección especial y la tercera amenazada. También se registraron Pionus senilis, especie amenazada; Falco peregrinus, Micrastur semitorquatus, Passerina ciris, Psarocolius montezuma, Myadestes occidentalis y Amazona albifrons, sujetas a protección especial. Este estudio brinda información sobre cómo la avifauna hace uso diferencial de dos coberturas de vegetación, la cual puede servir para generar estrategias sustentables para el manejo y conservación del bosque.

BIOLOGÍA Y QUÍMICA

Del bosque a la cocina: los hongos comestibles silvestres

RAUL VALLE MARQUINA ALEJANDRO GARCIA FLORES ARACELI TEGOMA COLOREANO EMIR BASURTO GARCÍA (2024, [Artículo])

La cocina mexicana es reflejo de nuestra historia, costumbres y tradiciones, así como de la biodiversidad y la cultura. En el territorio nacional se encuentra una gran variedad de ingredientes y recursos alimentarios, entre ellos, los hongos silvestres. Muchas comunidades tienen una antigua tradición asociada a su recolección, preparación, consumo y venta. En términos de nutrición, son un alimento de alta calidad y propiedades funcionales para incorporar a la dieta, pero también un importante medio de subsistencia. En este artículo se aborda el aprovechamiento tradicional de hongos comestibles silvestres en el Corredor Biológico Chichinautzin, área natural protegida ubicada al norte del estado de Morelos.

Mexican cuisine is a reflection of our history, customs and traditions, as well as biodiversity and culture. In the national territory there is a wide variety of ingredients and food resources, including wild mushrooms. Many communities have an ancient tradition associated with their collection, preparation, consumption and sale. In terms of nutrition, they are a high-quality food and functional properties to incorporate into the diet, but also an important means of subsistence. This article discusses the traditional use of wild edible mushrooms in the Chichinautzin Biological Corridor, a protected natural area located in the north of the state of Morelos.

BIOLOGÍA Y QUÍMICA CIENCIAS DE LA VIDA hongos comestibles silvestres, conocimiento tradicional, Corredor Biológico Chichinautzin, cocina tradicional mexicana