Mapping QTL for phenological and grain-related traits in a mapping population derived from high-zinc-biofortified wheat

Gopalareddy Krishnappa Govindan Velu (2023, [Artículo])

DArT-Seq Gene Mapping Yield Component Traits CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA WHEAT QUANTITATIVE TRAIT LOCI CANDIDATE GENES QUANTITATIVE TRAIT LOCI MAPPING YIELD COMPONENTS BIOFORTIFICATION

Genome-wide association analyses of agronomic traits and Striga hermonthica resistance in pearl millet

Hussein Shimelis Chris Ojiewo Abhishek Rathore (2023, [Artículo])

Pearl millet (Pennisetum glaucum [L.] R. Br.) is a nutrient-dense, relatively drought-tolerant cereal crop cultivated in dry regions worldwide. The crop is under-researched, and its grain yield is low (< 0.8 tons ha−1) and stagnant in the major production regions, including Burkina Faso. The low productivity of pearl millet is mainly attributable to a lack of improved varieties, Striga hermonthica [Sh] infestation, downy mildew infection, and recurrent heat and drought stress. Developing high-yielding and Striga-resistant pearl millet varieties that satisfy the farmers’ and market needs requires the identification of yield-promoting genes linked to economic traits to facilitate marker-assisted selection and gene pyramiding. The objective of this study was to undertake genome-wide association analyses of agronomic traits and Sh resistance among 150 pearl millet genotypes to identify genetic markers for marker-assisted breeding and trait introgression. The pearl millet genotypes were phenotyped in Sh hotspot fields and screen house conditions. Twenty-nine million single nucleotide polymorphisms (SNPs) initially generated from 345 pearl millet genotypes were filtered, and 256 K SNPs were selected and used in the present study. Phenotypic data were collected on days to flowering, plant height, number of tillers, panicle length, panicle weight, thousand-grain weight, grain weight, number of emerged Striga and area under the Striga number progress curve (ASNPC). Agronomic and Sh parameters were subjected to combined analysis of variance, while genome-wide association analysis was performed on phenotypic and SNPs data. Significant differences (P < 0.001) were detected among the assessed pearl millet genotypes for Sh parameters and agronomic traits. Further, there were significant genotype by Sh interaction for the number of Sh and ASNPC. Twenty-eight SNPs were significantly associated with a low number of emerged Sh located on chromosomes 1, 2, 3, 4, 6, and 7. Four SNPs were associated with days-to-50%-flowering on chromosomes 3, 5, 6, and 7, while five were associated with panicle length on chromosomes 2, 3, and 4. Seven SNPs were linked to thousand-grain weight on chromosomes 2, 3, and 6. The putative SNP markers associated with a low number of emerged Sh and agronomic traits in the assessed genotypes are valuable genomic resources for accelerated breeding and variety deployment of pearl millet with Sh resistance and farmer- and market-preferred agronomic traits.

High-Yielding Varieties Striga-Resistant Agronomic Parameters CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA GENOME-WIDE ASSOCIATION STUDIES STRIGA HERMONTHICA PEARL MILLET

The impact of 1.5 °C and 2.0 °C global warming on global maize production and trade

Wei Xiong Tariq Ali (2022, [Artículo])

Future Climate Scenario Data Yield Reduction Risk CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA CLIMATE CHANGE GREENHOUSE EFFECT MAIZE MITIGATION SIMULATION ACCLIMATIZATION ADAPTATION GLOBAL WARMING

PROPUESTA DE MANEJO DE LA PESQUERÍA EMERGENTE DE MERLUZA DEL PACÍFICO NORTE Merluccius productus EN EL GOLFO DE ULLOA, BAJA CALIFORNIA SUR

PABLO MORA ZAMACONA (2023, [Tesis de doctorado])

"La merluza del Pacífico Merluccius productus se distribuye desde Alaska hasta el sur de México, con una población particular descrita al sur de la península de Baja California conocida como merluza enana, de la que poco se sabe. Dicha población actualmente no es pescada comercialmente, por lo que representa un recurso con potencial de explotación. Las pesquerías potenciales y emergentes crean desafíos y oportunidades para los administradores pesqueros que necesitan tomar decisiones sobre cómo gestionar de forma sostenible una pesquería previa a su inicio. Este trabajo propone y analiza posibles medidas alternativas de gestión pesquera para esta potencial pesquería, bajo incertidumbre biológica y de mercado. Debido al desconocimiento de diversos aspectos de la biología del recurso primeramente se analizó el crecimiento individual del stock y posteriormente se realizó un análisis bioeconómico de la potencial pesquería.

Para el análisis del crecimiento individual se utilizó un total de 240 otolitos y datos de longitud patrón de 932 especímenes muestreados de mayo a diciembre de 2015. La formación anual de incrementos en los otolitos se verificó mediante la relación de incremento marginal y el análisis de borde. La edad se estimó a partir de recuentos de anillos en secciones sagitales de otolitos y el crecimiento se analizó mediante un enfoque de inferencia multimodelo. Se consideraron los modelos de crecimiento de von Bertalanffy (VBGM), VBGM generalizado, Gompertz, Logístico y Johnson, los cuales se ajustaron a conjuntos de datos de talla a la edad observados y retrocalculados agrupados por sexo. Según el criterio de información de Akaike, el VBGM generalizado fue el más apropiado para las hembras (L∞= 31.36 cm, k= 0.15 cm año-1), mientras que el VBGM proporcionó el mejor ajuste para los machos (L∞= 25.35 cm, k= 0.28 cm año-1).

El análisis bioeconómico de alternativas de manejo para una potencial pesquería de merluza enana indicó que una nueva pesquería de dicho stock podría ser biológicamente sostenible y económicamente rentable, bajo un conjunto de estrategias de gestión y reglas de control. Se recomienda un acceso limitado con bajo esfuerzo pesquero ya que resulta más redituable por barco y biológicamente precautorio, considerando la alta incertidumbre asociada con la explotación de una población virgen..."

"The Pacific hake Merluccius productus is distributed from Alaska to southern Mexico, with a particular population described south of the Baja California peninsula known as dwarf hake, about which little is known. This population is not currently commercially fished; hence it represents a resource with potential for exploitation. Potential and emerging fisheries create challenges and opportunities for fishery managers who need to make decisions about how to sustainably manage a fishery prior to its initiation. This work proposes and analyzes possible alternative fishery management measures for this potential fishery, under biological and market uncertainty. Due to the lack of knowledge of various aspects of the biology of the resource, the individual growth of the stock was first analyzed and subsequently a bioeconomic analysis of the potential fishery was carried out.

A total of 240 otoliths and standard-length data from 932 specimens sampled from May to December 2015 were used for the analysis of individual growth. The annual formation of otolith increments was verified using the marginal increment analysis and the edge analysis. Age was estimated from annuli counts in sagittal sections of otoliths and growth was analyzed using a multi-model inference approach. The von Bertalanffy growth models (VBGM), generalized VBGM, Gompertz, Logistic and Johnson growth models were considered, which were fitted to observed and back calculated length-at-age data sets grouped by sex. According to Akaike's information criterion, the generalized VBGM was the most appropriate for females (L∞= 31.36 cm, k= 0.15 cm year-1), while the VBGM provided the best fit for males (L∞= 25.35 cm, k= 0.28 cm year-1).

The bioeconomic analysis of management alternatives for a potential dwarf hake fishery indicated that a new fishery for said stock could be biologically sustainable and economically profitable, under a set of management strategies and control rules. Limited access with low fishing effort is recommended as it is more profitable by boat and biologically precautionary, considering the high uncertainty associated with the exploitation of an unfished stock. Despite the combination of high fishing costs and low prices, the fishery could still be profitable in the long term, although there is risk of overexploitation if high fishing effort is allowed..."

Merluza enana, stock no explotado, crecimiento individual, análisis bioeconómico, pesquería potencial Dwarf hake, unexploited stock, individual growth, bioeconomic analysis, potential fishery CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA CIENCIAS AGRARIAS PECES Y FAUNA SILVESTRE REGLAMENTACIÓN Y CONTROL REGLAMENTACIÓN Y CONTROL