Solanum tuberosum Microtuber Development under Darkness Unveiled through RNAseq Transcriptomic Analysis

ELIANA VALENCIA LOZANO LISSET HERRERA ISIDRON Osiel Salvador Recoder-Meléndez Aarón Barraza Celis JOSE LUIS CABRERA PONCE (2022, [Artículo])

"Potato microtuber (MT) development through in vitro techniques are ideal propagules for producing high quality potato plants. MT formation is influenced by several factors, i.e., photoperiod, sucrose, hormones, and osmotic stress. We have previously developed a protocol of MT induction in medium with sucrose (8% w/v), gelrite (6g/L), and 2iP as cytokinin under darkness. To understand the molecular mechanisms involved, we performed a transcriptome-wide analysis. Here we show that 1715 up- and 1624 down-regulated genes were involved in this biological process. Through the protein–protein interaction (PPI) network analyses performed in the STRING database (v11.5), we found 299 genes tightly associated in 14 clusters. Two major clusters of up-regulated proteins fundamental for life growth and development were found: 29 ribosomal proteins (RPs) interacting with 6 PEBP family members and 117 cell cycle (CC) proteins. The PPI network of up-regulated transcription factors (TFs) revealed that at least six TFs–MYB43, TSF, bZIP27, bZIP43, HAT4 and WOX9–may be involved during MTs development. The PPI network of down-regulated genes revealed a cluster of 83 proteins involved in light and photosynthesis, 110 in response to hormone, 74 in hormone mediate signaling pathway and 22 related to aging."

transcriptome-wide analysis, microtubers, potato, Solanum tuberosum, darkness, cell cycle, ribosomal proteins, PEBP family genes, cytokinin BIOLOGÍA Y QUÍMICA CIENCIAS DE LA VIDA GENÉTICA GENÉTICA MOLECULAR DE PLANTAS GENÉTICA MOLECULAR DE PLANTAS

Un gen para ti, un gen para mí: flujo genético entre parientes silvestres y plantas domesticadas

Mauricio Heredia Pech MARIANA CHAVEZ PESQUEIRA (2023, [Artículo])

El flujo genético se refiere al movimiento de genes entre individuos o poblaciones. En ocasiones puede darse también entre especies cercanamente emparentadas, como en el caso de las plantas domesticadas y sus parientes silvestres. Los parientes silvestres son de gran importancia para la seguridad alimentaria debido a su gran diversidad genética, que los convierte en una reserva natural de genes. Las consecuencias del flujo genético silvestre-domesticado dependerán de la intensidad y dirección en la que se muevan los genes, siendo la preocupación principal el riesgo que puede existir para el mantenimiento de la diversidad genética de los parientes silvestres.

CONSERVACION DISPERSION DIVERSIDAD GENETICA FUERZA EVOLUTIVA SELECCION ARTIFICIAL BIOLOGÍA Y QUÍMICA CIENCIAS DE LA VIDA BIOLOGÍA VEGETAL (BOTÁNICA) ECOLOGÍA VEGETAL ECOLOGÍA VEGETAL

Trade-offs in the genetic control of functional and nutritional quality traits in UK winter wheat

Nick Fradgley Keith Gardner Stéphanie M. Swarbreck Alison Bentley (2022, [Artículo])

CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA WHEAT GENETIC CONTROL NUTRITIVE VALUE QUANTITATIVE TRAIT LOCI

Improving hybrid rice breeding programs via stochastic simulations: number of parents, number of hybrids, tester update, and genomic prediction of hybrid performance

Roberto Fritsche-Neto Marlee Labroo (2024, [Artículo])

Genomic Prediction Reciprocal Recurrent Selection Heterotic Pools CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA STOCHASTIC MODELS RICE HYBRIDS GENETIC IMPROVEMENT GENETIC GAIN BREEDING PROGRAMMES

Genetic structure analysis and identifying key founder inbred lines in diverse elite sub-tropical maize inbred lines

Melaku Gedil Ana Luisa Garcia-Oliveira Nnanna Unachukwu Cesar Petroli Sarah Hearne Abebe Menkir (2023, [Artículo])

Genetic Relationship Desirable Target Traits Parental Selection CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA GENETIC STRUCTURES INBRED LINES MAIZE BREEDING PROGRAMMES

Emmer wheat eco-geographic and genomic congruence shapes phenotypic performance under mediterranean climate

Dana Fuerst SHAILESH YADAV Rajib Roychowdhury Carolina Sansaloni Sariel Hübner (2022, [Artículo])

Emmer Wheat CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA WHEAT GENETIC VARIATION CLIMATE PHENOLOGY YIELDS MEDITERRANEAN CLIMATE

Association of specific expansins with growth in maize leaves is maintained under environmental, genetic, and developmental sources of variation

Francois Tardieu (2007, [Artículo])

Environmental Stimuli Expansins CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA CELLS CROPS GENETIC ENGINEERING PROTEINS TISSUE EPIDERMIS ZEA MAYS

Exploring the agronomic performance and molecular characterization of diverse spring durum wheat germplasm in Kazakhstan

Kadyrzhan Mukin Abdelfattah DABABAT Timur Savin Vladimir Shamanin Vadim Yusov Alexey Morgounov (2023, [Artículo])

Germplasm Characterization Molecular Markers CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA TRITICUM TURGIDUM GERMPLASM GENETIC MARKERS BREEDING

Indian wheat genomics initiative for harnessing the potential of wheat germplasm resources for breeding disease-resistant, nutrient-dense, and climate-resilient cultivars

Sundeep Kumar Reyaz Mir Pawan Kulwal UTTAM KUMAR suneel kumar Shailendra Sharma Ravinder Singh Amit Singh Dr. Subhash Bhardwaj Manoj Prasad Kuldeep Singh (2022, [Artículo])

Indian Wheat Genomics Initiative Genomic Selection CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA WHEAT GENETIC RESOURCES MARKER-ASSISTED SELECTION GENE BANKS STRESS ABIOTIC STRESS BIOTIC STRESS

Editorial: Sorghum and pearl millet as climate resilient crops for food and nutrition security

Palak Chaturvedi Mahalingam Govindaraj Govindan Velu Wolfram Weckwerth (2022, [Artículo])

Climate Smart Crops Foxtail Millet CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA BREEDING FINGER MILLET FOOD SECURITY SETARIA ITALICA GENETIC RESOURCES PEARL MILLET SORGHUM