Chapter 9. Genome-informed discovery of genes and framework of functional genes in wheat

awais rasheed Rudi Appels (2024, [Capítulo de libro])

Wheat Genomics KASP Markers Gene Discovery Functional Markers Gene Networks CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA WHEAT GENOMICS SINGLE NUCLEOTIDE POLYMORPHISMS FUNCTIONAL GENOMICS

Accumulation of wheat phenolic acids under different nitrogen rates and growing environments

Wenfei Tian Yong Zhang Zhonghu He (2022, [Artículo])

Functional Wheat Trans-Ferulic Acid Nitrogen Management Environment Interaction CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA WHEAT PHENOLIC ACIDS NITROGEN ENVIRONMENT ANTIOXIDANTS

Bacterial communities in the rhizosphere at different growth stages of maize cultivated in soil under conventional and conservation agricultural practices

Yendi Navarro-Noya Bram Govaerts Nele Verhulst Luc Dendooven (2022, [Artículo])

Farmers in Mexico till soil intensively, remove crop residues for fodder and grow maize often in monoculture. Conservation agriculture (CA), including minimal tillage, crop residue retention and crop diversification, is proposed as a more sustainable alternative. In this study, we determined the effect of agricultural practices and the developing maize rhizosphere on soil bacterial communities. Bulk and maize (Zea mays L.) rhizosphere soil under conventional practices (CP) and CA were sampled during the vegetative, flowering and grain filling stage, and 16S rRNA metabarcoding was used to assess bacterial diversity and community structure. The functional diversity was inferred from the bacterial taxa using PICRUSt. Conservation agriculture positively affected taxonomic and functional diversity compared to CP. The agricultural practice was the most important factor in defining the structure of bacterial communities, even more so than rhizosphere and plant growth stage. The rhizosphere enriched fast growing copiotrophic bacteria, such as Rhizobiales, Sphingomonadales, Xanthomonadales, and Burkholderiales, while in the bulk soil of CP other copiotrophs were enriched, e.g., Halomonas and Bacillus. The bacterial community in the maize bulk soil resembled each other more than in the rhizosphere of CA and CP. The bacterial community structure, and taxonomic and functional diversity in the maize rhizosphere changed with maize development and the differences between the bulk soil and the rhizosphere were more accentuated when the plant aged. Although agricultural practices did not alter the effect of the rhizosphere on the soil bacterial communities in the flowering and grain filling stage, they did in the vegetative stage.

Community Assembly Functional Diversity Intensive Agricultural Practices Plant Microbiome CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA SUSTAINABLE AGRICULTURE TILLAGE SOIL BACTERIA MAIZE

Variation of the ferulic acid concentration and kernel weight in CIMMYT bread wheat germplasm and selection of lines for functional food production

Wenfei Tian Maria Itria Ibba Govindan Velu Shuanghe Cao Zhonghu He (2024, [Artículo])

CIMMYT Germplasm CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA GERMPLASM FERULIC ACID FUNCTIONAL FOODS PHYTOCHEMICALS YIELD POTENTIAL WHEAT FOOD PRODUCTION

Validation of Novel spot blotch disease resistance alleles identified in unexplored wheat (Triticum aestivum L.) germplasm lines through KASP markers

suneel kumar UTTAM KUMAR Guriqbal Singh Dhillon Amit Singh Vinod Mishra Pradeep Kumar Bhati Saikat Das Ramesh Chand Kuldeep Singh Sundeep Kumar (2022, [Artículo])

Spot Blotch Genome-Wide Association Study Marker Trait Association KASP Markers Kompetitive Allele Specific PCR CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA TRITICUM AESTIVUM MATERIAL TRANSFER AGREEMENTS MARKER-ASSISTED SELECTION DISEASE RESISTANCE WHEAT

Exploring the agronomic performance and molecular characterization of diverse spring durum wheat germplasm in Kazakhstan

Kadyrzhan Mukin Abdelfattah DABABAT Timur Savin Vladimir Shamanin Vadim Yusov Alexey Morgounov (2023, [Artículo])

Germplasm Characterization Molecular Markers CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA TRITICUM TURGIDUM GERMPLASM GENETIC MARKERS BREEDING

Exploring the genetic diversity and population structure of wheat landrace population conserved at ICARDA genebank

Muhammad Massub Tehseen Fatma Aykut Tonk Ahmed Amri Carolina Sansaloni Ezgi Kurtulus Muhammad Salman Mubarik Kumarse Nazari (2022, [Artículo])

Wheat Landraces Genetic Diversity SNP Markers Analysis of Molecular Variance AMOVA CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA BREEDING DISCRIMINANT ANALYSIS GENETIC VARIATION GENETIC DISTANCE GENETIC IMPROVEMENT GENETIC MARKERS HEXAPLOIDY LANDRACES POPULATION STRUCTURE SINGLE NUCLEOTIDE POLYMORPHISM TRITICUM AESTIVUM WHEAT

Identification and characterisation of stripe rust resistance genes Yr66 and Yr67 in wheat cultivar VL gehun 892

Harbans Bariana Lakshmi Kant Naeela Qureshi Urmil Bansal (2022, [Artículo])

Kompetitive Allele Specific PCR Stripe Rust Yr Genes CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA GENETIC MARKERS MARKER-ASSISTED SELECTION RUSTS WHEAT GENES

QTL cluster analysis and marker development for kernel traits based on DArT markers in spring bread wheat (Triticum aestivum L.)

CAIXIA LAN Ravi Singh (2023, [Artículo])

QTL mapping Kernel-Related Traits Putative Candidate Gene KASP Markers CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA KERNELS QUANTITATIVE TRAIT LOCI MAPPING TRITICUM AESTIVUM SINGLE NUCLEOTIDE POLYMORPHISM

Genetic diversity and genome-wide association study for the phenology response of winter wheats of North America, Western Asia, and Europe

Susanne Dreisigacker Marta Lopes Miguel Sanchez-Garcia (2023, [Artículo])

Winter Wheat Panel Precision Phenology Effective Markers CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA GENETIC DIVERSITY (AS RESOURCE) GENOME-WIDE ASSOCIATION STUDIES PHENOLOGY PHOTOPERIODICITY POPULATION STRUCTURE VERNALIZATION WINTER WHEAT