Autor: Jose Crossa

Replication Data for: A multivariate Poisson deep learning model for genomic prediction of count data

Osval Antonio Montesinos-Lopez Pawan Singh Jose Crossa (2020)

Genomic selection (GS) is an important method used in plant and animal breeding. The experimental data provided in this study contain counting data. These datasets were used to support research on efficient methodologies for multivariate count data outcomes including a multivariate Poisson deep neural network (MPDN) model, a conventional multivariate generalized Poisson regression model, and a univariate Poisson deep learning models. The results of the analyses are presented in a corresponding publication.

Dataset

CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA

Replication Data for: Optimizing Genomic-Enabled Prediction: A Feature Weighting Approach for Enhancing within Family Accuracy

Guillermo Gerard Paolo Vitale Susanne Dreisigacker Morten Lillemo Jose Crossa (2023)

This study provides supplemental data to support the study on Optimizing Genomic-Enabled Prediction: A Feature Weighting Approach for Enhancing within Family Accuracy.

Dataset

CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA

Replication Data for: Genome-based genotype × environment prediction enhances potato (Solanum tuberosum L.) improvement using pseudo-diploid and polysomic tetraploid modeling

Rodomiro Ortiz Jose Crossa Paulino Pérez-Rodríguez Jaime Cuevas (2021)

Potato breeding efficiency can be improved by increasing the reliability of selection and identifying promising germplasm for crossing. The data provided in these datasets were used to compare the prediction accuracy of genomic-estimated breeding values for several potato (Solanum tuberosum L.) breeding clones and released cultivars evaluated in three locations in northern and southern Sweden. The analysis included several traits such as tuber starch percentage and total tuber weight. Results of the analyses are reported in an accompanying journal article.

Dataset

CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA

Replication Data for: The relative efficiency of a Bayesian linear phenotypic selection index to predict the net genetic merit in plants

J. Jesús Cerón Rojas Sergio Pérez-Elizalde Jose Crossa (2020)

In breeding, the net genetic merit of candidates for selection is a linear combination of the breeding values of the traits of interest weighted by their respective economic values. This dataset contains the R code that accompanies a publication that describes an evaluation of linear phenotypic selection indices (LPSI) and Bayesian linear phenotypic selection indices (BLPSI).

Dataset

CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA

Yield data for pedigree-based prediction models with genotype × environment interaction in multi-environment trials of CIMMYT wheat

Sivakumar Sukumaran Jose Crossa DIEGO JARQUIN Matthew Paul Reynolds (2016)

This study contains spring wheat yield data (1st, 2nd, and 3rd WYCYTs and 1st, 2nd, 3rd and 4th SATYNs) from 136 international environments that were used to evaluate the predictive ability of different models in diverse environments by modeling G×E using the pedigree-derived additive relationship matrix (A matrix).

Dataset

CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA