Potential of Omics to control diseases and pests in the Coconut tree

MIGUEL ALONSO TZEC SIMA Jean Wildort Félix María Inés Granados Alegría Mónica Aparicio Ortiz Dilery Juarez Monroy Damian Mayo Sarai Vivas-Lopez Rufino Gómez-Tah Blondy Beatriz Canto Canché Maxim Berezovski Ignacio Rodrigo Islas Flores (2022, [Artículo])

The coconut palm (Cocos nucifera L.) is a common crop in pantropical areas facing various challenges, one of them being the control of diseases and pests. Diseases such as bud rot caused by Phytophthora palmivora, lethal yellowing caused by phytoplasmas of the types 16SrIV-A, 16SrIV-D or 16SrIV-E, among others, and pests like the coconut palm weevil, Rhynchophorus vulneratus (Coleoptera: Curculionidae), and the horned beetle, Oryctes rhinocerus (Coleoptera: Scarabaeidae), are controlled by applying pesticides, pheromones and cultural control. These practices do not guarantee eradication since some causal agents have become resistant or are imbedded in infected tissues making them difficult to eradicate. This review condenses the current genomics, transcriptomics, proteomics and metabolomics studies which are being conducted with the aim of understanding the pathosystems associated with the coconut palm, highlighting the findings generated by omics studies that may become future targets for the control of diseases and pests in the coconut crop. © 2022 by the authors.

COCOS NUCIFERA L. OMICS PESTS INSECTS DISEASES PATHOGENS BIOLOGÍA Y QUÍMICA CIENCIAS DE LA VIDA BIOLOGÍA MOLECULAR BIOLOGÍA MOLECULAR DE PLANTAS BIOLOGÍA MOLECULAR DE PLANTAS

Chronic toxicity of shrimp feed added with silver nanoparticles (Argovit-4®) in Litopenaeus vannamei and immune response to white spot syndrome virus infection

Carlos Rosendo Romo Quiñonez Píndaro Álvarez Ruiz CLAUDIO HUMBERTO MEJIA RUIZ NINA BOGDANCHIKOVA Alexey Pestryakov CARINA GAMEZ JIMENEZ WENCESLAO VALENZUELA QUIÑONEZ Magnolia Montoya Mejía EUSEBIO NAVA PEREZ (2022, [Artículo])

"In recent years, the application of silver nanoparticles (AgNPs) as antibacterial compounds has been widely used in human and veterinary medicine. In this work, we investigated the effects of AgNPs (Argovit-4 R ) as feed additives (feed-AgNPs) on shrimp (Litopenaeus vannamei) using three different methods: 1) chronic toxicity after 28 days of feeding, 2) Effects against white spot syndrome virus (WSSV) challenged by oral route, and 3) transcriptional responses of immune-related genes (PAP, ProPO, CTL-3, Crustin, PEN3, and PEN4) following WSSV infection. The results showed that the feed-AgNPs did not interfere with the growth and survival of shrimp. Also, mild lesions in the hepatopancreas were recorded, proportional to the frequency of the feed-AgNP supply. Challenge test versus WSSV showed that feeding every 7 days with feed-AgNPs reduced mortality, reaching a survival rate of 53%, compared to the survival rates observed in groups fed every 4 days, daily and control groups of feed-AgNPs for the 30%, 10%, and 7% groups, respectively. Feed-AgNPs negatively regulated the expression of PAP, ProPO, and Crustin genes after 28 days of treatment and altered the transcriptional responses of PAP, ProPO, CTL-3, and Crustin after WSSV exposure. The results showed that weekly feeding-AgNPs could partially prevent WSSV infection in shrimp culture. However, whether or not transcriptional responses against pathogens are advantageous remains to be elucidated."

Silver nanoparticles, Shrimp, Aquaculture, Chronic toxicity, WSSV, AgNP, Argovit, Litopenaeus vannamei , Silver fed, White spot syndrome virus BIOLOGÍA Y QUÍMICA CIENCIAS DE LA VIDA INMUNOLOGÍA INMUNIZACIÓN INMUNIZACIÓN

Agroecology and systems analysis for sustainable agriculture

Santiago Lopez-Ridaura (2022, [Artículo])

Multi-Criteria Tradeoffs Synergies CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA AGROECOLOGY INDICATORS SUSTAINABILITY FARMING SYSTEMS

Radiative transfer model inversion using high-resolution hyperspectral airborne imagery – Retrieving maize LAI to access biomass and grain yield

Ahmed Kayad Francelino Rodrigues Marco Sozzi Francesco Pirotti Francesco Marinello Urs Schulthess Bruno Gerard Marie Weiss (2022, [Artículo])

PROSAIL Vegetation Indices Field Variability Digital Farming CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA PRECISION AGRICULTURE MAIZE GRAIN YIELD BIOMASS VEGETATION VEGETATION INDEX

CCAFS Outcome Synthesis Report:

Mathieu Ouédraogo John Recha Maren Radeny Paresh Shirsath Peter Läderach Osana Bonilla-Findji (2021, [Documento de trabajo])

CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA CLIMATE-SMART AGRICULTURE INVESTMENT FARMING SYSTEMS CLIMATE CHANGE

Evaluation of multiple satellite precipitation products for rainfed maize production systems over Vietnam

Paresh Shirsath Dakshina Murthy Kadiyala (2022, [Artículo])

Rainfall Datasets Satellite Rainfall Estimates CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA RAIN RAINFED FARMING DATA SATELLITES

The contribution of strong and weak ties to resilience: The case of small-scale maize farming systems in Mexico

Tania Carolina Camacho Villa Ernesto Adair Zepeda Villarreal Julio Díaz-José Roberto Rendon-Medel Bram Govaerts (2023, [Artículo])

Social Network Analysis Farm Typologies Social Ties Strong Ties CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA INNOVATION NETWORKS PERSISTENCE SOCIAL NETWORK ANALYSIS MAIZE FARMING SYSTEMS

Impact of different on-farm management practices on bread wheat quality: a case study in the Yaqui Valley

Facundo Tabbita Iván Ortíz-Monasterios Francisco Javier Pinera-Chavez Maria Itria Ibba Carlos Guzman (2023, [Artículo])

BACKGROUND: Continuous development of new wheat varieties is necessary to satisfy the demands of farmers, industry, and consumers. The evaluation of candidate genotypes for commercial release under different on-farm conditions is a strategy that has been strongly recommended to assess the performance and stability of new cultivars in heterogeneous environments and under different farming systems. The main objectives of this study were to evaluate the grain yield and quality performance of ten different genotypes across six contrasting farmers' field conditions with different irrigation and nitrogen fertilization levels, and to develop suggestions to aid breeding programs and farmers to use resources more efficiently. Genotype and genotype by environment (GGE) interaction biplot analyses were used to identify the genotypes with the strongest performance and greatest stability in the Yaqui Valley. RESULTS: Analyses showed that some traits were mainly explained by the genotype effect, others by the field management conditions, and the rest by combined effects. The most representative and diverse field conditions in the Yaqui Valley were also identified, a useful strategy when breeders have limited resources. The independent effects of irrigation and nitrogen levels and their interaction were analyzed for each trait. The results showed that full irrigation was not always necessary to maximize grain yield in the Yaqui Valley. Other suggestions for more efficient use of resources are proposed. CONCLUSIONS: The combination of on-farm trials with GGE interaction analyses is an effective strategy to include in breeding programs to improve processes and resources. Identifying the most outstanding and stable genotypes under real on-farm systems is key to the development of novel cultivars adapted to different management and environmental conditions.

Wheat Quality Bread Wheat Bread-Making CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA SOFT WHEAT QUALITY FARMING SYSTEMS

Agroecology can promote climate change adaptation outcomes without compromising yield in smallholder systems

Sieglinde Snapp Yodit Kebede Eva Wollenberg (2023, [Artículo])

A critical question is whether agroecology can promote climate change mitigation and adaptation outcomes without compromising food security. We assessed the outcomes of smallholder agricultural systems and practices in low- and middle-income countries (LMICs) against 35 mitigation, adaptation, and yield indicators by reviewing 50 articles with 77 cases of agroecological treatments relative to a baseline of conventional practices. Crop yields were higher for 63% of cases reporting yields. Crop diversity, income diversity, net income, reduced income variability, nutrient regulation, and reduced pest infestation, indicators of adaptative capacity, were associated with 70% or more of cases. Limited information on climate change mitigation, such as greenhouse gas emissions and carbon sequestration impacts, was available. Overall, the evidence indicates that use of organic nutrient sources, diversifying systems with legumes and integrated pest management lead to climate change adaptation in multiple contexts. Landscape mosaics, biological control (e.g., enhancement of beneficial organisms) and field sanitation measures do not yet have sufficient evidence based on this review. Widespread adoption of agroecological practices and system transformations shows promise to contribute to climate change services and food security in LMICs. Gaps in adaptation and mitigation strategies and areas for policy and research interventions are finally discussed.

CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA CLIMATE CHANGE CROPS FOOD SUPPLY GAS EMISSIONS GREENHOUSE GASES FARMING SYSTEMS AGROECOLOGY FOOD SECURITY LESS FAVOURED AREAS SMALLHOLDERS YIELDS NUTRIENTS BIOLOGICAL PEST CONTROL CARBON SEQUESTRATION LEGUMES

How diverse are farming systems on the Eastern Gangetic Plains of South Asia? A multi-metric and multi-country assessment

Brendan Brown Pragya Timsina Emma Karki (2023, [Artículo])

While crop diversification has many benefits and is a stated government objective across the Eastern Gangetic Plains (EGP) of South Asia, the complexity of assessment has led to a rather limited understanding on the progress towards, and status of, smallholder crop diversification. Most studies focus on specific commodities or report as part of a singular index, use outdated secondary data, or implement highly localized studies, leading to broad generalisations and a lack of regional comparison. We collected representative primary data with more than 5000 households in 55 communities in Eastern Nepal, West Bengal (India) and Northwest Bangladesh to explore seasonally based diversification experiences and applied novel metrics to understand the nuanced status of farm diversification. While 66 crops were commercially grown across the region, only five crops and three crop families were widely grown (Poaceae, Malvaceae, and Brassicaceae). Non-cereal diversification across the region was limited (1.5 crops per household), though regional differentiation were evident particularly relating to livestock and off-farm activities, highlighting the importance of cross border studies. In terms of farmer's largest commercial plots, 20% of systems contained only rice, and 57% contained only rice/wheat/maize, with substantial regional diversity present. This raises concerns regarding the extent of commercially oriented high value and non-cereal diversification, alongside opportunities for diversification in the under-diversified pre-monsoon and monsoon seasons. Future promotional efforts may need to focus particularly on legumes to ensure the future sustainability and viability of farming systems.

Agricultural Production Systems Farming Systems Change CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA AGRICULTURAL PRODUCTION CROPPING SYSTEMS DIVERSIFICATION FARMING SYSTEMS SUSTAINABLE INTENSIFICATION