De Novo assembly and annotation of the Pacific calico scallop (Argopecten ventricosus) transcriptome for immune-related gene discovery

RUTH ESCAMILLA MONTES GENARO DIARTE PLATA GABRIELA BERENICE MENDOZA MALDONADO Aarón Barraza Celis Carlos Eliud Angulo Valadez Seyed Hossein Hoseinifar Jesús Arturo Fierro Coronado ANTONIO LUNA GONZALEZ (2022, [Artículo])

"Invertebrates' immune defense mechanisms play a critical role in pathogen recognition and elimination. De novo assembly and annotation of the Argopecten ventricosus transcriptome were performed for the immune-related gene identification. Scallops (height: 4.4 cm) were challenged with inactivated Vibrio parahaemolyticus IPNGS16. The RNA from different tissues was pooled for a single cDNA library construction sequenced by NextSeq 500 platform 2×75 paired‐end chemistry. Before de novo assembling with Trinity, reads were analyzed with FastQC, Trimmomatic, and Prinseq. Assembled sequences were analyzed by CD-HIT-EST and TransDecoder. The corresponding annotation was performed against NCBI-nr, RefSeq protein, and KAAS (KEGG) databases. The Trinity assembly yielded 107,516 contigs. TransDecoder yielded 25,285 sequences as CDSs of which, 16,123 were annotated against the NCBI-nr protein, most of them scored with Crassostrea gigas data. Gene ontology mapped sequences (15,262) were classified in molecular functions (~13,000), cellular components (~11,000), and biological processes (~13,000). The KAAS analysis showed biological categories for metabolism (13%), cellular processes (12%), genetic information processing (10%), organismal systems (19%), environmental information (13%), and human diseases (33 %). Within the organismal systems, 467 immune-related genes (KO) were identified. Sixty-four immune-related genes were annotated/blasted against the NCBI-nr and RefSeq protein databases. An RT-qPCR was performed to analyze the expression level of immune-related genes obtained in the transcriptome analysis in scallops (height 4.5 cm) treated with probiotic bacilli added to culture water. Bacilli significantly increased the expression of the HSP70 and PGRP genes. The gene transcripts analysis of A. ventricosus will better understand its immune response against pathogens in culture systems."

Argopecten ventricosus, calico scallop, transcriptome, bivalve, immune genes BIOLOGÍA Y QUÍMICA CIENCIAS DE LA VIDA BIOLOGÍA ANIMAL (ZOOLOGÍA) INMUNOLOGÍA INMUNOLOGÍA

Compuestos bioactivos presentes en geopropóleos de Melipona beecheii y su potencial uso en la medicina tradicional

ANGEL DANIEL HERRERA ESPAÑA OMAR ARISTEO PEÑA MORAN ROGER GASPAR CAUICH KUMUL (2023, [Artículo])

El interés actual por estudios con productos naturales, ha llevado a realizar investigaciones con geopropóleos. Este producto natural producido por especies de abejas sin aguijón (meliponinos), resulta de una mezcla de material resinoso vegetal, arcilla y secreciones salivales. Estudios farmacológicos realizados con extractos de geopropóleos de Melipona beecheii, han demostrado sus propiedades anticancerígenas, antimicrobianas y antioxidantes, las cuales se relacionan con la presencia de diversos compuestos bioactivos. Debido a sus propiedades terapéuticas, este producto natural puede ser considerado como una potencial alternativa dentro de la medicina tradicional maya.

ABEJA SIN AGUIJON ACTIVIDAD ANTIMICROBIANA FENOLES FLAVONOIDES PROPIEDADES TERAPEUTICAS BIOLOGÍA Y QUÍMICA CIENCIAS DE LA VIDA BIOLOGÍA ANIMAL (ZOOLOGÍA) INVERTEBRADOS INVERTEBRADOS

Redescription of Selenops minutus F.O. Pickard-Cambridge, 1900 (Aranei: Selenopidae)

DAVID CHAME VAZQUEZ MARIA LUISA JIMENEZ JIMENEZ CARLOS PALACIOS CARDIEL (2022, [Artículo])

"In this work we redescribe and rediagnose both sexes of the flattie spider Selenops minutus F.O. Pickard-Cambridge, 1900. In addition, we provide the first record of S. minutus from Mexico."

Araneae, new record, flattie spider, Chiapas, Mexico BIOLOGÍA Y QUÍMICA CIENCIAS DE LA VIDA BIOLOGÍA ANIMAL (ZOOLOGÍA) TAXONOMÍA ANIMAL TAXONOMÍA ANIMAL

Voter´´´'s dilemma between honest and competent candidates in the 2018 elections in Mexico and Brazil

José Daniel Sousa Oliva (2023, [Artículo, Artículo])

This article is dedicated to understanding and explaining the electoral dilemma “Dishonest, but competent” and “Honest, but incompetent” in the elections of legislators, governors and municipal presidents in 2018 in Mexico and Brazil. The research questions that guided the investigation are: Why are there voters in Mexico and Brazil who vote for “dishonest” candidates? And how do the voters of those countries decide their vote in the face of this dilemma? The theoretical approach of this work is Social Psychology through two analytical tools: the Funnel of Causality and the Tripartite Model of Attitudes. The methodology is mixed, quantitative and qualitative, using statistical models with data from the international surveys World Values Survey and Comparative Studies of Electoral Systems, as well as the application of Focus Groups in the distance modality. In this way, four categories of voter are proposed: moralist, moralist-moderate, pragmatic-moderate and pragmatic. The arguments of this work are: first, that regardless of cultural differences, there is an “affective voter” “non-rational” who makes decisions based on emotions and intuition, demonstrating that the affective components of attitudes are more relevant than the cognitive ones in electoral choice; second, that voting for “dishonest” candidates is determined under a greater influence of “short-term factors” such as candidate characteristics and short-term events rather than “long-term factors” such as party loyalties and ideology.

politics, electoral behavior, political culture, democracy, public opinion. política, comportamiento electoral, cultura política, democracia, opinión pública. CIENCIAS SOCIALES CIENCIAS SOCIALES

Chapter 8. Wheat rusts: Current status, prospects of genetic control and integrated approaches to enhance resistance durability

sridhar bhavani Ravi Singh David Hodson JULIO HUERTA_ESPINO Mandeep Randhawa (2022, [Capítulo de libro])

Rust Resistance Race Specific Genes Adult Plant Resistance Genes Breeding Technologies CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA RUSTS DISEASE RESISTANCE ADULT PLANT RESISTANCE BREEDING TECHNOLOGY

Closing the yield gap of soybean (Glycine max (L.) Merril) in Southern Africa: a case of Malawi, Zambia, and Mozambique

Siyabusa Mkuhlani Isaiah Nyagumbo (2023, [Artículo])

Introduction: Smallholder farmers in Sub-Saharan Africa (SSA) are increasingly producing soybean for food, feed, cash, and soil fertility improvement. Yet, the difference between the smallholder farmers’ yield and either the attainable in research fields or the potential from crop models is wide. Reasons for the yield gap include low to nonapplication of appropriate fertilizers and inoculants, late planting, low plant populations, recycling seeds, etc. Methods: Here, we reviewed the literature on the yield gap and the technologies for narrowing it and modelled yields through the right sowing dates and suitable high-yielding varieties in APSIM. Results and Discussion: Results highlighted that between 2010 and 2020 in SSA, soybean production increased; however, it was through an expansion in the cropped area rather than a yield increase per hectare. Also, the actual smallholder farmers’ yield was 3.8, 2.2, and 2.3 times lower than the attainable yield in Malawi, Zambia, and Mozambique, respectively. Through inoculants, soybean yield increased by 23.8%. Coupling this with either 40 kg ha−1 of P or 60 kg ha−1 of K boosted the yields by 89.1% and 26.0%, respectively. Overall, application of 21–30 kg ha-1 of P to soybean in SSA could increase yields by about 48.2%. Furthermore, sowing at the right time increased soybean yield by 300%. Although these technologies enhance soybean yields, they are not fully embraced by smallholder farmers. Hence, refining and bundling them in a digital advisory tool will enhance the availability of the correct information to smallholder farmers at the right time and improve soybean yields per unit area.

Decision Support Tools Digital Tools Site-Specific Recommendations CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA DECISION SUPPORT SYSTEMS LEGUMES YIELDS SOYBEANS

The Banana MaWRKY18, MaWRKY45, MaWRKY60 and MaWRKY70 Genes Encode Functional Transcription Factors and Display Differential Expression in Response to Defense Phytohormones

SERGIO GARCIA LAYNES VIRGINIA AURORA HERRERA VALENCIA Lilia Guadalupe Tamayo Torres VERONICA LIMONES BRIONES FELIPE ALONSO BARREDO POOL FRAY MARTIN BAAS ESPINOLA Ángel Gabriel Alpuche Solís CARLOS ALBERTO PUCH HAU SANTY PERAZA ECHEVERRIA (2022, [Artículo])

"WRKY transcription factors (TFs) play key roles in plant defense responses through phytohormone signaling pathways. However, their functions in tropical fruit crops, especially in banana, remain largely unknown. Several WRKY genes from the model plants rice (OsWRKY45) and Arabidopsis (AtWRKY18, AtWRKY60, AtWRKY70) have shown to be attractive TFs for engineering disease resistance. In this study, we isolated four banana cDNAs (MaWRKY18, MaWRKY45, MaWRKY60, and MaWRKY70) with homology to these rice and Arabidopsis WRKY genes. The MaWRKY cDNAs were isolated from the wild banana Musa acuminata ssp. malaccensis, which is resistant to several diseases of this crop and is a progenitor of most banana cultivars. The deduced amino acid sequences of the four MaWRKY cDNAs revealed the presence of the conserved WRKY domain of ~60 amino acids and a zinc-finger motif at the N-terminus. Based on the number of WRKY repeats and the structure of the zinc-finger motif, MaWRKY18 and MaWRKY60 belong to group II of WRKY TFs, while MaWRKY45 and MaWRKY70 are members of group III. Their corresponding proteins were located in the nuclei of onion epidermal cells and were shown to be functional TFs in yeast cells. Moreover, expression analyses revealed that the majority of these MaWRKY genes were upregulated by salicylic acid (SA) or methyl jasmonate (MeJA) phytohormones, although the expression levels were relatively higher with MeJA treatment. The fact that most of these banana WRKY genes were upregulated by SA or MeJA, which are involved in systemic acquired resistance (SAR) or induced systemic resistance (ISR), respectively, make them interesting candidates for bioengineering broad-spectrum resistance in this crop."

Banana Transcription factor WRKY Defense phytohormones Salicylic acid Methyl jasmonate SAR ISR Broad-spectrum resistance BIOLOGÍA Y QUÍMICA CIENCIAS DE LA VIDA GENÉTICA GENÉTICA

Identification and characterisation of stripe rust resistance genes Yr66 and Yr67 in wheat cultivar VL gehun 892

Harbans Bariana Lakshmi Kant Naeela Qureshi Urmil Bansal (2022, [Artículo])

Kompetitive Allele Specific PCR Stripe Rust Yr Genes CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA GENETIC MARKERS MARKER-ASSISTED SELECTION RUSTS WHEAT GENES

Seed integrity, effect of temperature and storage time on germination of Populus luziarum and P. primaveralepensis, endangered subtropical species from Mexico

César Jacobo Pereira MIGUEL ANGEL MUÑIZ CASTRO JOSE ANTONIO VAZQUEZ GARCIA Joel David Flores Rivas ALEJANDRO MUÑOZ URIAS FRANCISCO MARTIN HUERTA MARTINEZ (2022, [Artículo])

"Background: Populus luziarum and P. primaveralepensis are endemic species of western Mexico; growing in riparian forests they are critically endangered. The best way to conserve their seeds is unknown, which could be limiting for their conservation.

Hypothesis: The germinability of both subtropical species is like that of boreal and template Salicaceae species that disperse seeds in spring and early summer, as they germinate quickly with high percentages, and rapidly lose their viability when stored at ambient temperature.

Studied species: Populus luziarum and P. primaveralepensis. Study site and dates: Western Trans-Mexican Volcanic Belt. Jalisco, Mexico. October 2019.

Methods: The physical integrity of the seeds was assessed by X-ray imaging and compared with germinability. In addition, the effect of storage time (nine weeks) under two temperatures (4 and 21 °C) on the percentage and mean germination rate was evaluated.

Results: No significant differences were found between physical integrity and germination in freshly collected seeds for both species. Germination in the first 24 hrs was 91 and 95 % for Populus luziarum and P. primaveralepensis, respectively (week 0). Germination percentages were lower when stored at 21 °C, but P. primaveralepensis was decreased more slowly.

Conclusions: Seeds of subtropical Populus respond similarly to those of species from temperate and boreal climates with early seed dispersal, a crucial condition for establishing ex situ reforestation and conservation programs."

Salicaceae Seed physical integrity Seed storage conditions Subtropical endemic species White poplars BIOLOGÍA Y QUÍMICA CIENCIAS DE LA VIDA BIOLOGÍA VEGETAL (BOTÁNICA) BIOLOGÍA VEGETAL (BOTÁNICA)

Urban muralism in cities and towns of Chiapas. Configuring collective experiences and recovering urban spaces

Maria de Lourdes Morales Vargas (2023, [Artículo, Artículo])

This article expresses some reflections on the practice of urban muralism and the result of the approach to urban muralism projects or initiatives that have taken place in some cities, towns and villages in the state of Chiapas. This approach has made it possible to describe the dynamics, forms of participation, processes and agents that participate in the configuration and collective expression of urban murals in these spaces. From descriptive ethnography and its tools it was possible to approach the experiences of urban intervention that coexist with the community, in streets, parks, business walls, houses. This has made it possible to understand the practice of urban muralism as an artistic, collective, community process, a project of regeneration or urban recovery and as a practice of symbolic production of incidence in the space where it is implanted, configuring multiple experiences.

URBAN MURALISM URBAN MURAL YOUTH CREATIVE PRACTICES RECOVERY OF URBAN SPACES muralismo urbano, mural urbano, arte calle, practicas creativas juveniles, proceso artístico. CIENCIAS SOCIALES; HUMANIDADES Y CIENCIAS DE LA CONDUCTA CIENCIAS SOCIALES HUMANIDADES Y CIENCIAS DE LA CONDUCTA