Genomic selection: A tool for accelerating the efficiency of molecular breeding for development of climate-resilient crops

UTTAM KUMAR Rajeev Ranjan Kumar Philomin Juliana Sundeep Kumar (2022, [Artículo])

Genomic Selection Single-Trait Genomic Selection Multi-Trait Genomic Selection Genomic Estimated Breeding Value Climate-Resilient Crops CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA MARKER-ASSISTED SELECTION CLIMATE CHANGE STRESS CLIMATE RESILIENCE CROPS ABIOTIC STRESS BIOTIC STRESS

High spatial resolution seasonal crop yield forecasting for heterogeneous maize environments in Oromia, Ethiopia

Kindie Tesfaye Vakhtang Shelia Pierre C. Sibiry Traore Dawit Solomon Gerrit Hoogenboom (2023, [Artículo])

Seasonal climate variability determines crop productivity in Ethiopia, where rainfed smallholder farming systems dominate in the agriculture production. Under such conditions, a functional and granular spatial yield forecasting system could provide risk management options for farmers and agricultural and policy experts, leading to greater economic and social benefits under highly variable environmental conditions. Yet, there are currently only a few forecasting systems to support early decision making for smallholder agriculture in developing countries such as Ethiopia. To address this challenge, a study was conducted to evaluate a seasonal crop yield forecast methodology implemented in the CCAFS Regional Agricultural Forecasting Toolbox (CRAFT). CRAFT is a software platform that can run pre-installed crop models and use the Climate Predictability Tool (CPT) to produce probabilistic crop yield forecasts with various lead times. Here we present data inputs, model calibration, evaluation, and yield forecast results, as well as limitations and assumptions made during forecasting maize yield. Simulations were conducted on a 0.083° or ∼ 10 km resolution grid using spatially variable soil, weather, maize hybrids, and crop management data as inputs for the Cropping System Model (CSM) of the Decision Support System for Agrotechnology Transfer (DSSAT). CRAFT combines gridded crop simulations and a multivariate statistical model to integrate the seasonal climate forecast for the crop yield forecasting. A statistical model was trained using 29 years (1991–2019) data on the Nino-3.4 Sea surface temperature anomalies (SSTA) as gridded predictors field and simulated maize yields as the predictand. After model calibration the regional aggregated hindcast simulation from 2015 to 2019 performed well (RMSE = 164 kg/ha). The yield forecasts in both the absolute and relative to the normal yield values were conducted for the 2020 season using different predictor fields and lead times from a grid cell to the national level. Yield forecast uncertainties were presented in terms of cumulative probability distributions. With reliable data and rigorous calibration, the study successfully demonstrated CRAFT's ability and applicability in forecasting maize yield for smallholder farming systems. Future studies should re-evaluate and address the importance of the size of agricultural areas while comparing aggregated simulated yields with yield data collected from a fraction of the target area.

CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA CROP MODELLING DECISION SUPPORT SYSTEMS FORECASTING MAIZE

Alternative cropping and feeding options to enhance sustainability of mixed crop-livestock farms in Bangladesh

Timothy Joseph Krupnik Jeroen Groot (2024, [Artículo])

We investigated alternative cropping and feeding options for large (>10 cows), medium (5–10 cows) and small (≤4 cows) mixed crop – livestock farm types, to enhance economic and environmental performance in Jhenaidha and Meherpur districts – locations with increasing dairy production – in south western Bangladesh. Following focus group discussions with farmers on constraints and opportunities, we collected baseline data from one representative farm from each farm size class per district (six in total) to parameterize the whole-farm model FarmDESIGN. The six modelled farms were subjected to Pareto-based multi-objective (differential evolution algorithm) optimization to generate alternative dairy farm and fodder configurations. The objectives were to maximize farm profit, soil organic matter balance, and feed self-reliance, in addition to minimizing feed costs and soil nitrogen losses as indicators of sustainability. The cropped areas of the six baseline farms ranged from 0.6 to 4.0 ha and milk production per cow was between 1,640 and 3,560 kg year−1. Feed self-reliance was low (17%–57%) and soil N losses were high (74–342 kg ha−1 year−1). Subsequent trade-off analysis showed that increasing profit and soil organic matter balance was associated with higher risks of N losses. However, we found opportunities to improve economic and environmental performance simultaneously. Feed self-reliance could be increased by intensifying cropping and substituting fallow periods with appropriate fodder crops. For the farm type with the largest opportunity space and room to manoeuvre, we identified four strategies. Three strategies could be economically and environmentally benign, showing different opportunities for farm development with locally available resources.

Ruminant Feed Pareto-Based Optimization Farm Bioeconomic Model CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA RUMINANT FEEDING BIOECONOMIC MODELS MIXED CROPPING FARMS LIVESTOCK

Editorial: Functional genomic approaches in molecular breeding for crop improvement

Philomin Juliana (2023, [Artículo])

CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA DNA MARKER-ASSISTED SELECTION QUANTITATIVE TRAIT LOCI CROP IMPROVEMENT

Unpacking the intra-household decision-making process among wheat growers in Bihar, India

Hom Nath Gartaula (2022, [Objeto de congreso])

CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA WHEAT CROP MANAGEMENT SMALLHOLDERS GENDER HOUSEHOLDS

The input reduction principle of agroecology is wrong when it comes to mineral fertilizer use in sub-Saharan Africa

Gatien Falconnier Marc Corbeels Frédéric Baudron Antoine Couëdel leonard rusinamhodzi bernard vanlauwe Ken Giller (2023, [Artículo])

Can farmers in sub-Saharan Africa (SSA) boost crop yields and improve food availability without using more mineral fertilizer? This question has been at the center of lively debates among the civil society, policy-makers, and in academic editorials. Proponents of the “yes” answer have put forward the “input reduction” principle of agroecology, i.e. by relying on agrobiodiversity, recycling and better efficiency, agroecological practices such as the use of legumes and manure can increase crop productivity without the need for more mineral fertilizer. We reviewed decades of scientific literature on nutrient balances in SSA, biological nitrogen fixation of tropical legumes, manure production and use in smallholder farming systems, and the environmental impact of mineral fertilizer. Our analyses show that more mineral fertilizer is needed in SSA for five reasons: (i) the starting point in SSA is that agricultural production is “agroecological” by default, that is, very low mineral fertilizer use, widespread mixed crop-livestock systems and large crop diversity including legumes, but leading to poor soil fertility as a result of widespread soil nutrient mining, (ii) the nitrogen needs of crops cannot be adequately met solely through biological nitrogen fixation by legumes and recycling of animal manure, (iii) other nutrients like phosphorus and potassium need to be replaced continuously, (iv) mineral fertilizers, if used appropriately, cause little harm to the environment, and (v) reducing the use of mineral fertilizers would hamper productivity gains and contribute indirectly to agricultural expansion and to deforestation. Yet, the agroecological principles directly related to soil fertility—recycling, efficiency, diversity—remain key in improving soil health and nutrient-use efficiency, and are critical to sustaining crop productivity in the long run. We argue for a nuanced position that acknowledges the critical need for more mineral fertilizers in SSA, in combination with the use of agroecological practices and adequate policy support.

Manure Crop Yields Smallholder Farming Systems Environmental Hazards CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA BIOLOGICAL NITROGEN FIXATION LEGUMES NUTRIENT BALANCE SOIL FERTILITY AGROECOLOGY YIELD INCREASES LITERATURE REVIEWS

Agricultural emissions reduction potential by improving technical efficiency in crop production

Arun Khatri-Chhetri Tek Sapkota sofina maharjan Paresh Shirsath (2023, [Artículo])

CONTEXT: Global and national agricultural development policies normally tend to focus more on enhancing farm productivity through technological changes than on better use of existing technologies. The role of improving technical efficiency in greenhouse gas (GHG) emissions reduction from crop production is the least explored area in the agricultural sector. But improving technical efficiency is necessary in the context of the limited availability of existing natural resources (particularly land and water) and the need for GHG emission reduction from the agriculture sector. Technical efficiency gains in the production process are linked with the amount of input used nd the cost of production that determines both economic and environmental gains from the better use of existing technologies. OBJECTIVE: To assess a relationship between technical efficiency and GHG emissions and test the hypothesis that improving technical efficiency reduces GHG emissions from crop production. METHODS: This study used input-output data collected from 10,689 rice farms and 5220 wheat farms across India to estimate technical efficiency, global warming potential, and emission intensity (GHG emissions per unit of crop production) under the existing crop production practices. The GHG emissions from rice and wheat production were estimated using the CCAFS Mitigation Options Tool (CCAFS-MOT) and the technical efficiency of production was estimated through a stochastic production frontier analysis. RESULTS AND CONCLUSIONS: Results suggest that improving technical efficiency in crop production can reduce emission intensity but not necessarily total emissions. Moreover, our analysis does not support smallholders tend to be technically less efficient and the emissions per unit of food produced by smallholders can be relatively high. Alarge proportion of smallholders have high technical efficiency, less total GHG emissions, and low emissions intensity. This study indicates the levels of technical efficiency and GHG emission are largely influenced by farming typology, i.e. choice and use of existing technologies and management practices in crop cultivation. SIGNIFICANCE: This study will help to promote existing improved technologies targeting GHG emissions reduction from the agriculture production systems.

Technical Efficiency Interventions CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA MITIGATION PRODUCTIVITY CROP PRODUCTION GREENHOUSE GAS EMISSIONS

Influence of residue type and method of placement on dynamics of decomposition and nitrogen release in maize-wheat-mungbean cropping on permanent raised beds: a litterbag study

ML JAT Rajeev Gupta (2022, [Artículo])

Decomposition Rate Nitrogen Release Placement Effect CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA CROP RESIDUES DEGRADATION NITROGEN PLACEMENT

A Novel Technique for Classifying Bird Damage to Rapeseed Plants Based on a Deep Learning Algorithm.

Ali Mirzazadeh Afshin Azizi Yousef Abbaspour_Gilandeh José Luis Hernández-Hernández Mario Hernández Hernández Iván Gallardo Bernal (2021, [Artículo])

Estimation of crop damage plays a vital role in the management of fields in the agricultura sector. An accurate measure of it provides key guidance to support agricultural decision-making systems. The objective of the study was to propose a novel technique for classifying damaged crops based on a state-of-the-art deep learning algorithm. To this end, a dataset of rapeseed field images was gathered from the field after birds¿ attacks. The dataset consisted of three classes including undamaged, partially damaged, and fully damaged crops. Vgg16 and Res-Net50 as pre-trained deep convolutional neural networks were used to classify these classes. The overall classification accuracy reached 93.7% and 98.2% for the Vgg16 and the ResNet50 algorithms, respectively. The results indicated that a deep neural network has a high ability in distinguishing and categorizing different image-based datasets of rapeseed. The findings also revealed a great potential of Deep learning-based models to classify other damaged crops.

rapeseed classification damaged crops deep neural networks INGENIERÍA Y TECNOLOGÍA CIENCIAS TECNOLÓGICAS TECNOLOGÍA DE LOS ALIMENTOS

Planting rice at monsoon onset could mitigate the impact of temperature stress on rice–wheat systems of Bihar, India

Carlo Montes Anton Urfels Eunjin Han Balwinder-Singh (2023, [Artículo])

Rainy Season TIMESAT APSIM Agricultural Production Systems Simulator Climate Adaptation CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA RICE WHEAT MONSOONS WET SEASON CROP MODELLING CLIMATE CHANGE ADAPTATION