Complex traits and candidate genes: estimation of genetic variance components across multiple genetic architectures

GIOVANNY COVARRUBIAS-PAZARAN Hans-Peter Piepho (2023, [Artículo])

Average Semivariance Linear Mixed Model Variance Component Estimation Polygenic Inheritance Oligogenic Inheritance Mendelian Inheritance CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA MENDELISM GENETIC VARIANCE GENOME-WIDE ASSOCIATION STUDIES PHENOTYPES CHROMOSOME MAPPING

Distance learning for farmers: Experience during the pandemic

Andrea Gardeazabal (2023, [Documento de trabajo])

In response to the COVID-19 pandemic's disruption of farmer training—a crucial component for enhancing the resilience and livelihoods of smallholder farmers—CIMMYT innovated educational solutions to sustain capacity building in agri-food systems. Addressing the challenges of limited mobile device access, poor internet connectivity, and digital illiteracy, CIMMYT implemented two pilot projects in Mexico. These projects facilitated distance learning for adult farmers in rural areas, employing both internet-based and non-internet methods. The non-internet approach utilized traditional media like print, while the internet-based approach leveraged WhatsApp for educational content delivery. Building on these experiences, CIMMYT expanded its offerings by creating micro -courses delivered through WhatsApp, hosted on the Co-LAB's new Learning Network platform, specifically targeting farmers. This paper delves into the various strategies, methods, and techniques adopted, documenting the learning outcomes, results, and key conclusions drawn from these innovative training initiatives.

Distance Learning Digital Inclusion Innovative Training CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA DISTANCE EDUCATION CAPACITY DEVELOPMENT METHODS COMMUNICATION TECHNOLOGY

User manual: How to use Agvisely to generate climate service advisories for livestock in Bangladesh

T.S Amjath-Babu Timothy Joseph Krupnik (2023, [Libro])

The Agvisely digital service for livestock integrates location-specific meteorological forecasts generated by the Bangladesh Meteorological Department (BMD) with species specific biological thresholds for weather variables (Temperature, rainfall, and temperature-humidity index (THI). When a biological threshold is to be breached in next five days' forecast, the system automatically generates location-specific management advice for livestock farmers. Advisories are based on a decision tree developed by the Bangladesh Livestock Research Institute (BLRI) and CIMMYT. Agvisely is a smart phone app and web-based service developed by the International Maize and Wheat Improvement Center (CIMMYT) CIMMYT with the support of USAID, securing the Food Systems of Asian Mega- Deltas (AMD) for Climate and Livelihood Resilience and the Transforming Agrifood Systems in South Asia (TAFSSA) initiatives in collaboration with Bangladesh Dept. of Agricultural Extension (DAE) and Bangladesh Meteorological Department (BMD).

CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA CLIMATE SERVICES LIVESTOCK DIGITAL TECHNOLOGY

Disruptive approach to integrate data in a digital environment: progress report CIMMYT-Bluenumber 2023

Andrea Gardeazabal (2023, [Documento de trabajo])

This report describes the process carried out a pilot project to evaluate a scalable disruptive approach to integrating data for agronomy research that also incentivizes sustainable production and enables traceability using open data sharing protocol with self-sovereign identity (SSI).

CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA DIGITAL TECHNOLOGY DATA AGRICULTURAL RESEARCH

Agricultural lime value chain efficiency for reducing soil acidity in Ethiopia

Moti Jaleta (2023, [Artículo])

Soil acidity is challenging agricultural production in Ethiopia. Above 43% of the farmland is under soil acidity problem and it leads to low crop yields and production losses. Ag-lime is widely considered as an effective remedy for amending soil acidity. This study assesses the current structure of ag-lime value chain and its functionality focusing on central parts of Ethiopia where lime is produced and channeled to acidity affected areas. The study uses Ethiopia as a case study and applies qualitative methods such as key informant interviews and focus group discussions to collect data from different actors in the ag-lime value chain. Key findings indicate that both public and private ag-lime producing factories are operating below their capacity. Due to limited enabling environments, the engagement of private sector in ag-lime value chain is minimal. In addition, farmers have a good awareness of soil acidity problem on their farms, and its causes and mitigation strategies in all regions. However, the adoption of ag-lime by smallholders was minimal. Overall, the current structure of the ag-lime value chain appears fragmented and needs improvement. Addressing soil acidity challenge through efficient ag-lime value chain could narrow lime supply-demand mismatches and increase widespread adoption by farmers to enhance crop productivity and food security in acidity-prone areas of the country.

CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA LIMES PRODUCTION COSTS VALUE CHAINS SOIL PH

Expanding the WOFOST crop model to explore options for sustainable nitrogen management: A study for winter wheat in the Netherlands

João Vasco Silva Pytrik Reidsma (2024, [Artículo])

Nitrogen (N) management is essential to ensure crop growth and to balance production, economic, and environmental objectives from farm to regional levels. This study aimed to extend the WOFOST crop model with N limited production and use the model to explore options for sustainable N management for winter wheat in the Netherlands. The extensions consisted of the simulation of crop and soil N processes, stress responses to N deficiencies, and the maximum gross CO2 assimilation rate being computed from the leaf N concentration. A new soil N module, abbreviated as SNOMIN (Soil Nitrogen for Organic and Mineral Nitrogen module) was developed. The model was calibrated and evaluated against field data. The model reproduced the measured grain dry matter in all treatments in both the calibration and evaluation data sets with a RMSE of 1.2 Mg ha−1 and the measured aboveground N uptake with a RMSE of 39 kg N ha−1. Subsequently, the model was applied in a scenario analysis exploring different pathways for sustainable N use on farmers' wheat fields in the Netherlands. Farmers' reported yield and N fertilization management practices were obtained for 141 fields in Flevoland between 2015 and 2017, representing the baseline. Actual N input and N output (amount of N in grains at harvest) were estimated for each field from these data. Water and N-limited yields and N outputs were simulated for these fields to estimate the maximum attainable yield and N output under the reported N management. The investigated scenarios included (1) closing efficiency yield gaps, (2) adjusting N input to the minimum level possible without incurring yield losses, and (3) achieving 90% of the simulated water-limited yield. Scenarios 2 and 3 were devised to allow for soil N mining (2a and 3a) and to not allow for soil N mining (2b and 3b). The results of the scenario analysis show that the largest N surplus reductions without soil N mining, relative to the baseline, can be obtained in scenario 1, with an average of 75%. Accepting negative N surpluses (while maintaining yield) would allow maximum N input reductions of 84 kg N ha−1 (39%) on average (scenario 2a). However, the adjustment in N input for these pathways, and the resulting N surplus, varied strongly across fields, with some fields requiring greater N input than used by farmers.

Crop Growth Models WOFOST CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA CROPS NITROGEN-USE EFFICIENCY WINTER WHEAT SOIL WATER

Identification and validation of stable quantitative trait loci for yield component traits in wheat

Yong Zhang Zhonghu He xianchun xia Yan Zhang Shuanghe Cao (2023, [Artículo])

Grain Number Per Spike KASP Markers QTL Mapping Thousand Grain Weight CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA QUANTITATIVE TRAIT LOCI MAPPING TRITICUM AESTIVUM GRAIN YIELD COMPONENTS MARKER-ASSISTED SELECTION

Identification and characterization of resistance loci to wheat leaf rust and stripe rust in Afghan landrace “KU3067”

CAIXIA LAN Ravi Singh JULIO HUERTA_ESPINO Zaifeng Li Evans Lagudah sridhar bhavani (2022, [Artículo])

Genetic Analysis Molecular Mapping Wheat Rusts APR Genes CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA ADULT PLANT RESISTANCE LANDRACES WHEAT RUSTS

The generation challenge programme platform: Semantic standards and workbench for crop science

Richard Bruskiewich Guy Davenport Mathieu Rouard Reinhard Simon Samart Wanchana Trushar Shah Victor Jun Ulat Andrew Farmer Pankaj Jaiswal Mark Wilkinson David Marshall Alyssa Collins (2008, [Artículo])

CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA CROP IMPROVEMENT GENETIC RESOURCES PLANT BREEDING BIODIVERSITY COMPUTER APPLICATIONS DIGITAL TECHNOLOGY DATA PROCESSING

The input reduction principle of agroecology is wrong when it comes to mineral fertilizer use in sub-Saharan Africa

Gatien Falconnier Marc Corbeels Frédéric Baudron Antoine Couëdel leonard rusinamhodzi bernard vanlauwe Ken Giller (2023, [Artículo])

Can farmers in sub-Saharan Africa (SSA) boost crop yields and improve food availability without using more mineral fertilizer? This question has been at the center of lively debates among the civil society, policy-makers, and in academic editorials. Proponents of the “yes” answer have put forward the “input reduction” principle of agroecology, i.e. by relying on agrobiodiversity, recycling and better efficiency, agroecological practices such as the use of legumes and manure can increase crop productivity without the need for more mineral fertilizer. We reviewed decades of scientific literature on nutrient balances in SSA, biological nitrogen fixation of tropical legumes, manure production and use in smallholder farming systems, and the environmental impact of mineral fertilizer. Our analyses show that more mineral fertilizer is needed in SSA for five reasons: (i) the starting point in SSA is that agricultural production is “agroecological” by default, that is, very low mineral fertilizer use, widespread mixed crop-livestock systems and large crop diversity including legumes, but leading to poor soil fertility as a result of widespread soil nutrient mining, (ii) the nitrogen needs of crops cannot be adequately met solely through biological nitrogen fixation by legumes and recycling of animal manure, (iii) other nutrients like phosphorus and potassium need to be replaced continuously, (iv) mineral fertilizers, if used appropriately, cause little harm to the environment, and (v) reducing the use of mineral fertilizers would hamper productivity gains and contribute indirectly to agricultural expansion and to deforestation. Yet, the agroecological principles directly related to soil fertility—recycling, efficiency, diversity—remain key in improving soil health and nutrient-use efficiency, and are critical to sustaining crop productivity in the long run. We argue for a nuanced position that acknowledges the critical need for more mineral fertilizers in SSA, in combination with the use of agroecological practices and adequate policy support.

Manure Crop Yields Smallholder Farming Systems Environmental Hazards CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA BIOLOGICAL NITROGEN FIXATION LEGUMES NUTRIENT BALANCE SOIL FERTILITY AGROECOLOGY YIELD INCREASES LITERATURE REVIEWS