Using Observed Residual Error Structure Yields the Best Estimates of Individual Growth Parameters

Marcelo Vidal Curiel Bernal EUGENIO ALBERTO ARAGON NORIEGA MIGUEL ANGEL CISNEROS MATA LAURA SANCHEZ VELASCO SYLVIA PATRICIA ADELHEID JIMENEZ ROSENBERG ALEJANDRO FRANCISCO PARES SIERRA (2021, [Artículo])

"Obtaining the best possible estimates of individual growth parameters is essential in studies of physiology, fisheries management, and conservation of natural resources since growth is a key component of population dynamics. In the present work, we use data of an endangered fish species to demonstrate the importance of selecting the right data error structure when fitting growth models in multimodel inference. The totoaba (Totoaba macdonaldi) is a fish species endemic to the Gulf of California increasingly studied in recent times due to a perceived threat of extinction. Previous works estimated individual growth using the von Bertalanffy model assuming a constant variance of length-at-age. Here, we reanalyze the same data under five different variance assumptions to fit the von Bertalanffy and Gompertz models. We found consistent significant differences between the constant and nonconstant error structure scenarios and provide an example of the consequences using the growth performance index _0 to show how using the wrong error structure can produce growth parameter values that can lead to biased conclusions. Based on these results, for totoaba and other related species, we recommend using the observed error structure to obtain the individual growth parameters."

multimodel inference, error structure, totoaba, growth performance BIOLOGÍA Y QUÍMICA CIENCIAS DE LA VIDA BIOLOGÍA ANIMAL (ZOOLOGÍA) FISIOLOGÍA ANIMAL FISIOLOGÍA ANIMAL

Propuesta de aplicación móvil para el sistema de Registro Único de Animales de Compañía (RUAC) con tecnología QR

Delfino Luna Saavedra (2023, [Otro, Trabajo de grado, maestría])

El presente proyecto tiene como objetivo diseñar y desarrollar una aplicación móvil, que servirá de apoyo a la operación de la plataforma web del sistema de Registro Único De Animales de Compañía RUAC. Dicha aplicación móvil permitirá hacer uso y consulta de la información incorporada al registro, ya que por sí sola no se tiene algún método de consulta y

vinculación a la identificación oficial y registro generado, mediante la implementación de tecnologías de código QR.

Por tal motivo, se formuló la interrogante ¿Mejoraría la eficiencia, precisión y la usabilidad del proceso de registro y seguimiento de animales de compañía en una aplicación móvil, así como la experiencia del usuario?

Dentro de la metodología el tipo de estudio en el que nos enfocamos, fue de manera cuali-cuantitativo, la cual nos ayudó a proporcionar profundidad en los datos, dispersión, riqueza interpretativa, contextualización del ambiente o entorno,

detalles y experiencias únicas; así como en el análisis de las mediciones obtenidas utilizando métodos estadísticos, llegando a una serie de conclusiones.

El corte de la investigación fue transversal, se recolectaron datos en un solo momento y en un tiempo único. En esta investigación, las técnicas aplicadas fueron la encuesta y la entrevista. Nuestra población objeto, fueron usuarios del

sistema de registro único de animales de compañía implementado por el gobierno de la Ciudad de México, tomando una muestra de 200 personas. Obteniendo los siguientes resultados: un 75% se le hace muy fácil navegar en el sitio web de

Registro Único De Animales de Compañía RUAC, sin embargo un 60 % manifestó no estar muy satisfecho/a con su experiencia general en el sitio, por lo cual el 95% optó por el desarrollo de una aplicación móvil innovadora que integre tecnologías de códigos QR con el Sistema de Registro Único de Animales de Compañía (RUAC), para su implementación en conjunto al sistema web actual, el 93% consideraría que la experiencia del usuario sería mucho mejor, así como se

llevaría un mejor control en temas de salud animal (esterilización, vacunación y desparasitación), caso de extravío y responsabilidad social. Se concluye finalmente que el desarrollo de una aplicación móvil mejorará la experiencia de

usuario, así como el incremento de la audiencia y su difusión.

Tecnologías QR Aplicaciones móviles Animales de compañía Identificación animal Conectividad a Internet Identificación animal INGENIERÍA Y TECNOLOGÍA CIENCIAS TECNOLÓGICAS TECNOLOGÍA DE LAS TELECOMUNICACIONES TECNOLOGÍA DE LAS TELECOMUNICACIONES

The cerato-mandibular ligament: a key functional trait for grazing in damselfishes (Pomacentridae)

Damien Olivier Bruno Frederich MILTON ALEJANDRO SPANOPOULOS ZARCO Eduardo Francisco Balart Páez Eric Parmentier (2014, [Artículo])

"The success of a taxonomic group can be promoted by a key character that allows the group to interact with its environment in a different way and to potentially occupy new niches. The Pomacentridae possess a synapomorphic trait, the cerato-mandibular (c-md) ligament, which joins the hyoid bar to the inner part of the lower jaw. It has previously been shown that this ligament is a key trait in communication in damselfishes because it enables them to slam the oral jaws shut causing teeth collision and sound production. This specific behavior of mouth closing could, however, also be used for other tasks, such as feeding. Many territorial damselfishes are referred to as farmers, due to their ability to manage algal crops on which they feed. This study hypothesizes that the c-md ligament provides an advantage for grazing filamentous algae, and should thus be considered a key trait for farming behavior."

Biomechanics, Evolution, Farming, Functional morphology BIOLOGÍA Y QUÍMICA CIENCIAS DE LA VIDA BIOLOGÍA ANIMAL (ZOOLOGÍA) ZOOLOGÍA MARINA ZOOLOGÍA MARINA

Compuestos bioactivos presentes en geopropóleos de Melipona beecheii y su potencial uso en la medicina tradicional

ANGEL DANIEL HERRERA ESPAÑA OMAR ARISTEO PEÑA MORAN ROGER GASPAR CAUICH KUMUL (2023, [Artículo])

El interés actual por estudios con productos naturales, ha llevado a realizar investigaciones con geopropóleos. Este producto natural producido por especies de abejas sin aguijón (meliponinos), resulta de una mezcla de material resinoso vegetal, arcilla y secreciones salivales. Estudios farmacológicos realizados con extractos de geopropóleos de Melipona beecheii, han demostrado sus propiedades anticancerígenas, antimicrobianas y antioxidantes, las cuales se relacionan con la presencia de diversos compuestos bioactivos. Debido a sus propiedades terapéuticas, este producto natural puede ser considerado como una potencial alternativa dentro de la medicina tradicional maya.

ABEJA SIN AGUIJON ACTIVIDAD ANTIMICROBIANA FENOLES FLAVONOIDES PROPIEDADES TERAPEUTICAS BIOLOGÍA Y QUÍMICA CIENCIAS DE LA VIDA BIOLOGÍA ANIMAL (ZOOLOGÍA) INVERTEBRADOS INVERTEBRADOS

Trophic ecology of Mexican Pacific harbor seal colonies using carbon and nitrogen stable isotopes

MARICELA JUAREZ RODRIGUEZ (2020, [Artículo])

There is limited information that provides a comprehensive understanding of the trophic ecology of Mexican Pacific harbor seal (Phoca vitulina richardii) colonies. While scat analysis has been used to determine the diet of some colonies, the integrative characterization of its feeding habits on broader temporal and spatial scales remains limited. We examined potential feeding grounds, trophic niche width, and overlap, and inferred the degree of dietary specialization using stable carbon and nitrogen isotope ratios (δ13C and δ15N) in this subspecies. We analyzed δ13C and δ15N on fur samples from pups collected at five sites along the western coast of the Baja California Peninsula, Mexico. Fur of natal coat of Pacific harbor seal pups begins to grow during the seventh month in utero until the last stage of gestation. Therefore pup fur is a good proxy for the mother's feeding habits in winter (∼December to March), based on the timing of gestation for the subspecies in this region. Our results indicated that the δ13C and δ15N values differed significantly among sampling sites, with the highest mean δ15N value occurring at the southernmost site, reflecting a well-characterized north to south latitudinal 15N-enrichment in the food web. The tendency identified in δ13C values, in which the northern colonies showed the most enriched values, suggests nearshore and benthic-demersal feeding habits. A low variance in δ13C and δ15N values for each colony (<1‰) and relatively small standard ellipse areas suggest a specialized foraging behavior in adult female Pacific harbor seals in Mexican waters. © 2020 Juárez-Rodríguez et al.

carbon, delta carbon 13, delta nitrogen 15, isotope, nitrogen, unclassified drug, carbon, nitrogen, Article, correlational study, feeding behavior, latitude, Mexico, nonhuman, organism colony, Pinnipedia, population abundance, species richness, troph BIOLOGÍA Y QUÍMICA CIENCIAS DE LA VIDA BIOLOGÍA ANIMAL (ZOOLOGÍA) BIOLOGÍA ANIMAL (ZOOLOGÍA)

Vibrissa growth rate in California sea lions based on environmental and isotopic oscillations

MARTHA PATRICIA ROSAS HERNANDEZ (2018, [Artículo])

Pinniped vibrissae provide information on changes in diet at seasonal and annual scales; however, species-specific growth patterns must first be determined in order to interpret these data. In this study, a simple linear model was used to estimate the growth rate of vibrissae from adult female California sea lions (Zalophus californianus) from San Esteban Island in the Gulf of California, Mexico. The δ15N and δ13C values do not display a marked oscillatory pattern that would permit direct determination of the time period contained in each vibrissa; thus, time (age) was calculated in two ways: 1) based on the correlation between the observed number of peaks (Fourier series) in the δ15N profile and the length of each vibrissa, and 2) through direct comparison with the observed number of peaks in the δ15N profile. Cross-correlation confirmed that the two peaks in the δ15N profile reflected the two peaks in the chlorophyll-a concentration recorded annually around the island. The mean growth rate obtained from the correlation was 0.08 ± 0.01 mm d-1, while that calculated based on the observed number of peaks was 0.10 ± 0.05 mm d-1. Both are consistent with the rates reported for adult females of other otariid species (0.07 to 0.11 mm d-1). Vibrissa growth rates vary by individual, age, sex, and species; moreover, small differences in the growth rate can result in significant differences over the time periods represented by the isotopic signal. Thus, it is important to assess this parameter on a species-by-species basis. © 2018 Rosas-Hernández et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

carbon, nitrogen, animal, California, chemistry, diet, female, island (geological), Mexico, Otariidae, physiology, Animals, California, Carbon Isotopes, Diet, Female, Islands, Mexico, Nitrogen Isotopes, Sea Lions BIOLOGÍA Y QUÍMICA CIENCIAS DE LA VIDA INMUNOLOGÍA INMUNOLOGÍA

Development of a next generation SNP genotyping array for wheat

Simon Griffiths Susanne Dreisigacker Alison Bentley Gina Brown-Guedira (2023, [Artículo])

Axiom Array High Throughput Genotyping Hexaploid Wheat Copy Number Variation Analysis CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA SINGLE NUCLEOTIDE POLYMORPHISMS WHEAT GENOTYPING GENETIC DIVERSITY (AS RESOURCE)

Genetic diversity and genome-wide association study for the phenology response of winter wheats of North America, Western Asia, and Europe

Susanne Dreisigacker Marta Lopes Miguel Sanchez-Garcia (2023, [Artículo])

Winter Wheat Panel Precision Phenology Effective Markers CIENCIAS AGROPECUARIAS Y BIOTECNOLOGÍA GENETIC DIVERSITY (AS RESOURCE) GENOME-WIDE ASSOCIATION STUDIES PHENOLOGY PHOTOPERIODICITY POPULATION STRUCTURE VERNALIZATION WINTER WHEAT

Evaluación del acondicionamiento reproductivo del ostión japonés (Magallana gigas) en dos sistemas de recirculación con prevalencia de polidóridos mediante la expresión de genes

Evaluation of Japanese oyster (Magallana gigas) broodstock conditioning in two recirculating systems with the prevalence of Polidorids through gene expression

Adrián Andrés Morales Guadarrama (2024, [Tesis de maestría])

El ostión Magallana gigas es ampliamente cultivado a nivel mundial. En Baja California, México, los laboratorios de reproducción deben acondicionar ostiones para su maduración y producción de gametos, y abastecer de semilla a los productores. En nuestro laboratorio, Sistemas de Recirculación Acuícola (SRA), con control del sistema CO2-Carbonatos (SRA-R) o sin control (SRA-C), han permitido madurar ostiones M. gigas y M. sikamea. Recientemente, los ostiones M. gigas acondicionados en nuestros SRA no maduraron, y algunos presentaron prevalencia de polidóridos (PP), poliquetos parásitos excavadores de concha. Para comprender la condición de los ostiones, evaluamos el efecto del SRA y de la PP sobre la expresión relativa de ocho genes asociados a biomineralización (VpATP y Tyr), inmunidad innata (P38, PGRP-L y TLR2) y reproducción (GnRH-RI, Vasa-like y SP1b) de M. gigas en dos etapas del acondicionamiento, 18 °C y 24 °C. La PP se determinó por la presencia de ampollas en la concha. Mediante RT-qPCR se determinó la expresión de VpATP, Tyr, P38, PGRP-L y TLR2 en el manto, y de GnRH-RI, Vasa-like y SP1b en la gónada. La expresión relativa se evaluó con un enfoque estadístico basado en un análisis Bayesiano de dos vías y comparaciones múltiples, p-valor significativo < 0.05 y corrección de Bonferroni. En 18 °C, la expresión de VpATP, Tyr, TLR2 y P38 fue mayor en ostiones con PP (CPP) que sin PP (SPP). En contraste, la expresión de GnRH-RI, Vasa-like y SP1b fue menor CPP que SPP. Dentro del SRA-C, en los ostiones CPP hubo mayor expresión de Tyr y menor expresión de Vasa-like y SP1b, respecto a los ostiones SPP. Esto sugiere que la PP induce la reparación de la concha y las respuestas inmune e inflamatoria en el manto mientras que en la gónada reduce el desarrollo de las células germinales. En 24 °C, en el SRA-R hubo menor expresión de SP1b respecto del SRA-C y sugiere menor división celular en la gónada. En conclusión, el SRA-R y la PP afectaron el balance energético del ostión japonés, limitando la energía y reflejando menor esfuerzo reproductivo en los ostiones del SRA-R al final del acondicionamiento reproductivo.

The Japanese oyster (Magallana gigas) is highly cultured worldwide. In Baja California, Mexico, the reproduction laboratories must condition oysters to maturity and have gametes to supply oyster seeds to producers. In our laboratory, recirculating aquaculture systems (RAS), with control of the CO2-Carbonate system (RAS-R) and without this control (RAS-C), have allowed oysters M. gigas and M. sikamea to mature. Recently, the M. gigas oysters conditioned in our RAS did not mature, and some have the prevalence of Polidorids (PP), shell-boring polychaete parasites. To understand the oysters' condition, we evaluated the effect of RAS and the PP on the relative expression of eight genes associated with biomineralization (VpATP and Tyr), innate immunity (P38, PGRP-L, and TLR2), and reproduction (GnRH-RI, Vasa-like, and SP1b) of M. gigas at two phases of broodstock conditioning, 18 °C and 24 °C. The PP was determined by mud blisters at the inner oyster shell. RT-qPCR determined the expression of VpATP, Tyr, p38, PGRP-L, and TLR2 in the mantle tissue and GnRH-RI, Vasa-like, and SP1b in the gonad tissue. The relative gene expression was evaluated by a Bayesian statistics frame based on a two-way and multiple comparison analysis, with significant p-value < 0.05 and Bonferroni correction. At 18 °C, there was higher expression of VpATP, Tyr, TLR2, and P38 in oysters with PP (WPP) than without PP (WOPP). In contrast, the expression of GnRH-RI, Vasa-like, and SP1b was less WPP than WOPP. It suggests that the PP induces shell repair and immune and inflammatory responses in mantle tissue, while in gonad tissue, it reduces the development of germinal cells. At 24 °C, in RAS-R, there was less expression of SP1b respect RAS-C, and it suggests less cellular division in the gonad. In conclusion, the RAS-R and the PP affect the energetic balance of the Japanese oyster, limiting the energy and reflecting less reproduction effort in oysters from RAS-R at the end of broodstock conditioning.

SRA, biomineralización, Vasa-like, Tyr, ostión RAS, biomineralization, Vasa-like, Tyr, oyster BIOLOGÍA Y QUÍMICA CIENCIAS DE LA VIDA GENÉTICA CITOGENÉTICA ANIMAL CITOGENÉTICA ANIMAL

Assessing the Response of Nematode Communities to Climate Change-Driven Warming: A Microcosm Experiment

RUTH GINGOLD WERMUTH (2013, [Artículo])

Biodiversity has diminished over the past decades with climate change being among the main responsible factors. One consequence of climate change is the increase in sea surface temperature, which, together with long exposure periods in intertidal areas, may exceed the tolerance level of benthic organisms. Benthic communities may suffer structural changes due to the loss of species or functional groups, putting ecological services at risk. In sandy beaches, free-living marine nematodes usually are the most abundant and diverse group of intertidal meiofauna, playing an important role in the benthic food web. While apparently many functionally similar nematode species co-exist temporally and spatially, experimental results on selected bacterivore species suggest no functional overlap, but rather an idiosyncratic contribution to ecosystem functioning. However, we hypothesize that functional redundancy is more likely to observe when taking into account the entire diversity of natural assemblages. We conducted a microcosm experiment with two natural communities to assess their stress response to elevated temperature. The two communities differed in diversity (high [HD] vs. low [LD]) and environmental origin (harsh vs. moderate conditions). We assessed their stress resistance to the experimental treatment in terms of species and diversity changes, and their function in terms of abundance, biomass, and trophic diversity. According to the Insurance Hypothesis, we hypothesized that the HD community would cope better with the stressful treatment due to species functional overlap, whereas the LD community functioning would benefit from species better adapted to harsh conditions. Our results indicate no evidence of functional redundancy in the studied nematofaunal communities. The species loss was more prominent and size specific in the HD; large predators and omnivores were lost, which may have important consequences for the benthic food web. Yet, we found evidence for alternative diversity-ecosystem functioning relationships, such as the Rivets and the Idiosyncrasy Model. © 2013 Gingold et al.

aquaculture, article, bacterivore, benthos, biodiversity, biomass, climate, community dynamics, controlled study, ecosystem, environmental temperature, microcosm, nematode, nonhuman, population abundance, species diversity, species richness, taxonomy CIENCIAS FÍSICO MATEMÁTICAS Y CIENCIAS DE LA TIERRA CIENCIAS DE LA TIERRA Y DEL ESPACIO OCEANOGRAFÍA OCEANOGRAFÍA